RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CTSWP56202 376 aa10.65□□□□□ -0.71
THBS3-210ENST00000541576 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.71
THBS3-210ENST00000541576 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.71
THBS3-210ENST00000541576 STAP2Q9UGK3 403 aa10.65□□□□□ -0.71
THBS3-210ENST00000541576 PLSCR1O15162 318 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 NTSR2O95665 410 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 ADRA2BP18089 450 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 SDSP20132 328 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 PROM2Q8N271 834 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 TTLL11Q8NHH1 800 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 AOX1Q06278 1338 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 MYH3P11055 1940 aa10.64□□□□□ -0.71
THBS3-210ENST00000541576 FRAT2O75474 233 aaPredicted RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 IFIT2P09913 472 aaKnown RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 HSP90B1P14625 803 aaKnown RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 IFIT5Q13325 482 aaKnown RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
THBS3-210ENST00000541576 AACSQ86V21 672 aa10.63□□□□□ -0.71
THBS3-210ENST00000541576 TBC1D9BQ66K14 1250 aa10.63□□□□□ -0.71
THBS3-210ENST00000541576 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 USP42Q9H9J4 1324 aaKnown RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 EYA2O00167 538 aa10.63□□□□□ -0.71
THBS3-210ENST00000541576 HCLS1P14317 486 aaPredicted RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 IL15P40933 162 aaPredicted RBP10.63□□□□□ -0.71
THBS3-210ENST00000541576 TAF7LQ5H9L4 462 aa10.63□□□□□ -0.71
THBS3-210ENST00000541576 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
THBS3-210ENST00000541576 TFCP2Q12800 502 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 EAF2Q96CJ1 260 aaPredicted RBP10.62□□□□□ -0.71
THBS3-210ENST00000541576 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 GREM2Q9H772 168 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 UBR3Q6ZT12 1888 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 CDC45O75419 566 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 CIAO1O76071 339 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 ITGA6P23229 1130 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 SSFA2P28290 1259 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
THBS3-210ENST00000541576 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
THBS3-210ENST00000541576 LRRC24Q50LG9 513 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
THBS3-210ENST00000541576 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
THBS3-210ENST00000541576 ERC2O15083 957 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
THBS3-210ENST00000541576 TNNI3KQ59H18 835 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 PI4K2BQ8TCG2 481 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 PUS3Q9BZE2 481 aaKnown RBP10.61□□□□□ -0.71
THBS3-210ENST00000541576 NYXQ9GZU5 481 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 ECHDC1Q9NTX5 307 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 FPGT-TNNI3KV9GXZ4 949 aa10.61□□□□□ -0.71
THBS3-210ENST00000541576 ERFEQ4G0M1 354 aa10.6□□□□□ -0.71
THBS3-210ENST00000541576 NBPF5PQ86XG9 351 aaPredicted RBP10.6□□□□□ -0.71
THBS3-210ENST00000541576 TRIM6-TRIM34B2RNG4 842 aa10.6□□□□□ -0.71
THBS3-210ENST00000541576 GLRX3O76003 335 aaKnown RBP10.6□□□□□ -0.71
THBS3-210ENST00000541576 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
THBS3-210ENST00000541576 DDX60Q8IY21 1712 aaKnown RBP10.6□□□□□ -0.71
THBS3-210ENST00000541576 TNS1Q9HBL0 1735 aaKnown RBP10.6□□□□□ -0.71
THBS3-210ENST00000541576 LAMB2P55268 1798 aa10.6□□□□□ -0.71
THBS3-210ENST00000541576 TLR7Q9NYK1 1049 aaKnown RBP10.6□□□□□ -0.71
THBS3-210ENST00000541576 TPTE2Q6XPS3 522 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 LDHAL6AQ6ZMR3 332 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 TBC1D32Q96NH3 1257 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 GPR108Q9NPR9 543 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 COL24A1Q17RW2 1714 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 CASC1Q6TDU7 716 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 RILPL2Q969X0 211 aa10.59□□□□□ -0.71
THBS3-210ENST00000541576 TUBGCP6Q96RT7 1819 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
THBS3-210ENST00000541576 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 SLKQ9H2G2 1235 aaPredicted RBP10.58□□□□□ -0.72
THBS3-210ENST00000541576 CNNM1Q9NRU3 951 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
THBS3-210ENST00000541576 CARMIL3Q8ND23 1372 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 RTL9Q8NET4 1388 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 GYS1P13807 737 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 NFIXQ14938 502 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 ZNF827Q17R98 1081 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 SLC10A5Q5PT55 438 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 AKT1S1Q96B36 256 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
THBS3-210ENST00000541576 NPHP1O15259 732 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 NEUROD6Q96NK8 337 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 RIPOR2Q9Y4F9 1068 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 RGPD3A6NKT7 1758 aaPredicted RBP10.58□□□□□ -0.72
THBS3-210ENST00000541576 RGPD4Q7Z3J3 1758 aa10.58□□□□□ -0.72
THBS3-210ENST00000541576 ABCC12Q96J65 1359 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 C22orf23Q9BZE7 217 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 SF3B3Q15393 1217 aaKnown RBP10.57□□□□□ -0.72
THBS3-210ENST00000541576 METTL24Q5JXM2 366 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
THBS3-210ENST00000541576 AKAP2Q9Y2D5 859 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms