RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 NECTIN1Q15223 517 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 CAMK4Q16566 473 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 TTC6Q86TZ1 520 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 KIAA1524Q8TCG1 905 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 ADCY9O60503 1353 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 KCNB2Q92953 911 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
PHACTR3-209ENST00000541461 NRAPQ86VF7 1730 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 CCDC192P0DO97 292 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 LIG1P18858 919 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 CDC37L1Q7L3B6 337 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 IL2RBP14784 551 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 KCNJ4P48050 445 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 VPS72Q15906 364 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 AACSQ86V21 672 aa12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 SMAP1Q8IYB5 467 aaPredicted RBP12.53□□□□□ -0.4
PHACTR3-209ENST00000541461 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.4
PHACTR3-209ENST00000541461 CEMIPQ8WUJ3 1361 aa12.52□□□□□ -0.4
PHACTR3-209ENST00000541461 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
PHACTR3-209ENST00000541461 EVI5LQ96CN4 794 aa12.52□□□□□ -0.41
PHACTR3-209ENST00000541461 C9orf78Q9NZ63 289 aaPredicted RBP12.52□□□□□ -0.41
PHACTR3-209ENST00000541461 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
PHACTR3-209ENST00000541461 CYP27B1O15528 508 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 NMIQ13287 307 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 MAP3K2Q9Y2U5 619 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 MRVI1Q9Y6F6 885 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 KRT85P78386 507 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 MTX1Q13505 466 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 LUZP1Q86V48 1076 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 CKAP2LQ8IYA6 745 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
PHACTR3-209ENST00000541461 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 SLC27A2O14975 620 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 PTGS1P23219 599 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 TYRO3Q06418 890 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 MAP4K1Q92918 833 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 CCDC8Q9H0W5 538 aaPredicted RBP12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 HOXB7P09629 217 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
PHACTR3-209ENST00000541461 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 TPM3P06753 285 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 PHKG2P15735 406 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 CBX1P83916 185 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 EAF2Q96CJ1 260 aaPredicted RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 QTRT2Q9H974 415 aaKnown RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 TLR7Q9NYK1 1049 aaKnown RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 SASH1O94885 1247 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 TEFQ10587 303 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 STK3Q13188 491 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 ATP2B3Q16720 1220 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
PHACTR3-209ENST00000541461 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 ANO6Q4KMQ2 910 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 TNMDQ9H2S6 317 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 CBX8Q9HC52 389 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 DBF4Q9UBU7 674 aaPredicted RBP12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 NRBP1Q9UHY1 535 aa12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
PHACTR3-209ENST00000541461 A0A0G2JS52 829 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms