RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 HSP90AB2PQ58FF8 381 aa7.56□□□□□ -1.2
CDKN3-206ENST00000541304 BPHLQ86WA6 291 aaPredicted RBP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 ANKRD24Q8TF21 1146 aa7.56□□□□□ -1.2
CDKN3-206ENST00000541304 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 THRAP3Q9Y2W1 955 aaKnown RBP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 PLCH1Q4KWH8 1693 aa7.56□□□□□ -1.2
CDKN3-206ENST00000541304 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
CDKN3-206ENST00000541304 LMOD3Q0VAK6 560 aa7.55□□□□□ -1.2
CDKN3-206ENST00000541304 NFX1Q12986 1120 aaKnown RBP7.55□□□□□ -1.2
CDKN3-206ENST00000541304 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
CDKN3-206ENST00000541304 TRIM46Q7Z4K8 759 aa7.55□□□□□ -1.2
CDKN3-206ENST00000541304 RUNDC1Q96C34 613 aa7.55□□□□□ -1.2
CDKN3-206ENST00000541304 CSB-PGBD3P0DP91 1061 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 EVA1CP58658 441 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 AMOTQ4VCS5 1084 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 MEX3CQ5U5Q3 659 aaKnown RBP7.54□□□□□ -1.2
CDKN3-206ENST00000541304 FAM9BQ8IZU0 186 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 FNBP4Q8N3X1 1017 aaPredicted RBP7.54□□□□□ -1.2
CDKN3-206ENST00000541304 GAS2L2Q8NHY3 880 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 CARD10Q9BWT7 1032 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 NRAPQ86VF7 1730 aa7.54□□□□□ -1.2
CDKN3-206ENST00000541304 OVOS2A0A0G2JMS6 1433 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 LRP6O75581 1613 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 PARP4Q9UKK3 1724 aaKnown RBP7.53□□□□□ -1.2
CDKN3-206ENST00000541304 ZBTB7CA1YPR0 619 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 FAM83GA6ND36 823 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 TIMP2P16035 220 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 WDR4P57081 412 aaKnown RBP7.53□□□□□ -1.2
CDKN3-206ENST00000541304 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
CDKN3-206ENST00000541304 ARID5BQ14865 1188 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 CCDC27Q2M243 656 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 SH3D19Q5HYK7 790 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 UNC5CLQ8IV45 518 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 RAPGEF4Q8WZA2 1011 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 KDM4CQ9H3R0 1056 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 BTG4Q9NY30 223 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
CDKN3-206ENST00000541304 TERTO14746 1132 aaKnown RBP7.52□□□□□ -1.21
CDKN3-206ENST00000541304 HTATSF1O43719 755 aaKnown RBP7.52□□□□□ -1.21
CDKN3-206ENST00000541304 CHRNA2Q15822 529 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 VPS72Q15906 364 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 CCDC184Q52MB2 194 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 TOM1L2Q6ZVM7 507 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.21
CDKN3-206ENST00000541304 NGLY1Q96IV0 654 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 C1QTNF2Q9BXJ5 285 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 GPBP1L1Q9HC44 474 aaPredicted RBP7.52□□□□□ -1.21
CDKN3-206ENST00000541304 NLRP2Q9NX02 1062 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.21
CDKN3-206ENST00000541304 BCL9LQ86UU0 1499 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 ADAMTS2O95450 1211 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 HSP90AB1P08238 724 aaKnown RBP7.51□□□□□ -1.21
CDKN3-206ENST00000541304 IL2RBP14784 551 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 TATP17735 454 aaPredicted RBP7.51□□□□□ -1.21
CDKN3-206ENST00000541304 FBLN1P23142 703 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PRKAR2BP31323 418 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 NR5A1Q13285 461 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PDE3BQ13370 1112 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PLEKHO1Q53GL0 409 aaPredicted RBP7.51□□□□□ -1.21
CDKN3-206ENST00000541304 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 ZNF772Q68DY9 489 aaPredicted RBP7.51□□□□□ -1.21
CDKN3-206ENST00000541304 MRPL14Q6P1L8 145 aaKnown RBP7.51□□□□□ -1.21
CDKN3-206ENST00000541304 SH3BP5LQ7L8J4 393 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 SH3RF1Q7Z6J0 888 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 TCP11L2Q8N4U5 519 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 C8orf37Q96NL8 207 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PLEKHF1Q96S99 279 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 SPG7Q9UQ90 795 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PCDH11XQ9BZA7 1347 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PCDH11YQ9BZA8 1340 aa7.51□□□□□ -1.21
CDKN3-206ENST00000541304 PKD1L3Q7Z443 1732 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 SCARF1Q14162 830 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 SUZ12Q15022 739 aaKnown RBP7.5□□□□□ -1.21
CDKN3-206ENST00000541304 SKIV2LQ15477 1246 aaKnown RBP7.5□□□□□ -1.21
CDKN3-206ENST00000541304 NFE2L2Q16236 605 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 LTV1Q96GA3 475 aaPredicted RBP7.5□□□□□ -1.21
CDKN3-206ENST00000541304 TRPC5Q9UL62 973 aaPredicted RBP7.5□□□□□ -1.21
CDKN3-206ENST00000541304 MAP4K5Q9Y4K4 846 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 DISP2A7MBM2 1401 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 ATRNO75882 1429 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 TNS2Q63HR2 1409 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 WNK3Q9BYP7 1800 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 SPATA31A1Q5TZJ5 1347 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 SPATA31A5Q5VU36 1347 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 SPATA31A7Q8IWB4 1347 aa7.5□□□□□ -1.21
CDKN3-206ENST00000541304 MAGEB6P1A0A0J9YX57 407 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 WIPF1O43516 503 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 ZIC2O95409 532 aaPredicted RBP7.49□□□□□ -1.21
CDKN3-206ENST00000541304 NR3C2P08235 984 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 HMOX1P09601 288 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 FSHRP23945 695 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 HNRNPUQ00839 825 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDKN3-206ENST00000541304 TRMT44Q8IYL2 757 aaKnown RBP7.49□□□□□ -1.21
CDKN3-206ENST00000541304 ZFP42Q96MM3 310 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms