RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
LTBR-209ENST00000541102 CWC25Q9NXE8 425 aaPredicted RBP18.21■□□□□ 0.51
LTBR-209ENST00000541102 POTECB2RU33 542 aa18.2■□□□□ 0.5
LTBR-209ENST00000541102 SP8Q8IXZ3 490 aa18.2■□□□□ 0.5
LTBR-209ENST00000541102 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
LTBR-209ENST00000541102 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
LTBR-209ENST00000541102 LARGE2Q8N3Y3 721 aa18.19■□□□□ 0.5
LTBR-209ENST00000541102 ZNF541Q9H0D2 1346 aa18.19■□□□□ 0.5
LTBR-209ENST00000541102 SNED1Q8TER0 1413 aa18.18■□□□□ 0.5
LTBR-209ENST00000541102 LAMB2P55268 1798 aa18.18■□□□□ 0.5
LTBR-209ENST00000541102 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
LTBR-209ENST00000541102 FLIIQ13045 1269 aa18.18■□□□□ 0.5
LTBR-209ENST00000541102 MPNDQ8N594 471 aa18.18■□□□□ 0.5
LTBR-209ENST00000541102 IGKV5-2P06315 115 aa18.17■□□□□ 0.5
LTBR-209ENST00000541102 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
LTBR-209ENST00000541102 FSTL1Q12841 308 aa18.17■□□□□ 0.5
LTBR-209ENST00000541102 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
LTBR-209ENST00000541102 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
LTBR-209ENST00000541102 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
LTBR-209ENST00000541102 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
LTBR-209ENST00000541102 FZD9O00144 591 aa18.16■□□□□ 0.5
LTBR-209ENST00000541102 PPIP5K2O43314 1243 aa18.16■□□□□ 0.5
LTBR-209ENST00000541102 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
LTBR-209ENST00000541102 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
LTBR-209ENST00000541102 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
LTBR-209ENST00000541102 TAF1P21675 1872 aa18.16■□□□□ 0.5
LTBR-209ENST00000541102 DDX60Q8IY21 1712 aaKnown RBP18.15■□□□□ 0.5
LTBR-209ENST00000541102 AOC3Q16853 763 aa18.15■□□□□ 0.5
LTBR-209ENST00000541102 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
LTBR-209ENST00000541102 NIM1KQ8IY84 436 aa18.15■□□□□ 0.5
LTBR-209ENST00000541102 SUPT20HQ8NEM7 779 aa18.15■□□□□ 0.5
LTBR-209ENST00000541102 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
LTBR-209ENST00000541102 PDE8AO60658 829 aa18.14■□□□□ 0.49
LTBR-209ENST00000541102 RPS8P62241 208 aaKnown RBP18.14■□□□□ 0.49
LTBR-209ENST00000541102 SEC31BQ9NQW1 1179 aa18.14■□□□□ 0.49
LTBR-209ENST00000541102 WDR90Q96KV7 1748 aa18.14■□□□□ 0.49
LTBR-209ENST00000541102 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
LTBR-209ENST00000541102 APLP1P51693 650 aa18.13■□□□□ 0.49
LTBR-209ENST00000541102 CCDC152Q4G0S7 254 aa18.13■□□□□ 0.49
LTBR-209ENST00000541102 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
LTBR-209ENST00000541102 RTFDC1Q9BY42 306 aaPredicted RBP18.13■□□□□ 0.49
LTBR-209ENST00000541102 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
LTBR-209ENST00000541102 IQCA1LA6NCM1 817 aa18.12■□□□□ 0.49
LTBR-209ENST00000541102 GPC2Q8N158 579 aa18.12■□□□□ 0.49
LTBR-209ENST00000541102 L3MBTL3Q96JM7 780 aaPredicted RBP18.12■□□□□ 0.49
LTBR-209ENST00000541102 COL4A5P29400 1685 aa18.12■□□□□ 0.49
LTBR-209ENST00000541102 F6X3S4 739 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 POTEJP0CG39 1038 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 VPS33BQ9H267 617 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 TAF1DQ9H5J8 278 aaPredicted RBP18.11■□□□□ 0.49
LTBR-209ENST00000541102 HACL1Q9UJ83 578 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 CDHR2Q9BYE9 1310 aa18.11■□□□□ 0.49
LTBR-209ENST00000541102 C6orf229H3BNL8 230 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 H7C1W4 665 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 GPSM2P81274 684 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 HTRA3P83110 453 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 GCKRQ14397 625 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 EAPPQ56P03 285 aaPredicted RBP18.1■□□□□ 0.49
LTBR-209ENST00000541102 BCL2L13Q9BXK5 485 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 ZNRF3Q9ULT6 936 aa18.1■□□□□ 0.49
LTBR-209ENST00000541102 RIMBP2O15034 1052 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 EPHX2P34913 555 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 CTSWP56202 376 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 CHADLQ6NUI6 762 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
LTBR-209ENST00000541102 TTLL11Q8NHH1 800 aa18.08■□□□□ 0.48
LTBR-209ENST00000541102 COL4A1P02462 1669 aa18.08■□□□□ 0.48
LTBR-209ENST00000541102 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
LTBR-209ENST00000541102 CXCL9Q07325 125 aa18.07■□□□□ 0.48
LTBR-209ENST00000541102 WASHC4Q2M389 1173 aa18.07■□□□□ 0.48
LTBR-209ENST00000541102 ANKRD18AQ8IVF6 992 aa18.07■□□□□ 0.48
LTBR-209ENST00000541102 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
LTBR-209ENST00000541102 GPR101Q96P66 508 aaPredicted RBP18.07■□□□□ 0.48
LTBR-209ENST00000541102 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
LTBR-209ENST00000541102 POLLQ9UGP5 575 aa18.07■□□□□ 0.48
LTBR-209ENST00000541102 CACNA1FO60840 1977 aa18.07■□□□□ 0.48
LTBR-209ENST00000541102 RAD17O75943 681 aa18.06■□□□□ 0.48
LTBR-209ENST00000541102 GREM2Q9H772 168 aa18.06■□□□□ 0.48
LTBR-209ENST00000541102 EPS15P42566 896 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 RARSP54136 660 aaKnown RBP18.05■□□□□ 0.48
LTBR-209ENST00000541102 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 TBC1D16Q8TBP0 767 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
LTBR-209ENST00000541102 SCN4AP35499 1836 aa18.05■□□□□ 0.48
LTBR-209ENST00000541102 DOK7Q18PE1 504 aa18.04■□□□□ 0.48
LTBR-209ENST00000541102 PNMA8AQ86V59 439 aaPredicted RBP18.04■□□□□ 0.48
LTBR-209ENST00000541102 EYA3Q99504 573 aa18.04■□□□□ 0.48
LTBR-209ENST00000541102 DBNDD1Q9H9R9 158 aa18.04■□□□□ 0.48
LTBR-209ENST00000541102 UFL1O94874 794 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 SCNN1DP51172 638 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 CASP7P55210 303 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 TNIP1Q15025 636 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms