RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SAPCD2Q86UD0 394 aa35.19■■■■□ 3.22
CHFR-218ENST00000540963 NLRP10Q86W26 655 aa35.19■■■■□ 3.22
CHFR-218ENST00000540963 CA12O43570 354 aa35.18■■■■□ 3.22
CHFR-218ENST00000540963 LMOD3Q0VAK6 560 aa35.18■■■■□ 3.22
CHFR-218ENST00000540963 PROSER3Q2NL68 480 aa35.18■■■■□ 3.22
CHFR-218ENST00000540963 RIPK4P57078 832 aa35.17■■■■□ 3.22
CHFR-218ENST00000540963 DDX46Q7L014 1031 aaKnown RBP35.17■■■■□ 3.22
CHFR-218ENST00000540963 GRM1Q13255 1194 aa35.16■■■■□ 3.22
CHFR-218ENST00000540963 TCIRG1Q13488 830 aa35.16■■■■□ 3.22
CHFR-218ENST00000540963 GRAPQ13588 217 aa35.16■■■■□ 3.22
CHFR-218ENST00000540963 COPS6Q7L5N1 327 aa35.16■■■■□ 3.22
CHFR-218ENST00000540963 GRAPLQ8TC17 118 aaPredicted RBP35.16■■■■□ 3.22
CHFR-218ENST00000540963 SH3TC1Q8TE82 1336 aa35.15■■■■□ 3.22
CHFR-218ENST00000540963 CELF2O95319 508 aaKnown RBP35.15■■■■□ 3.22
CHFR-218ENST00000540963 BCL2L13Q9BXK5 485 aa35.14■■■■□ 3.22
CHFR-218ENST00000540963 LRRC37AA6NMS7 1700 aa35.14■■■■□ 3.22
CHFR-218ENST00000540963 ANXA1P04083 346 aa35.13■■■■□ 3.21
CHFR-218ENST00000540963 HCLS1P14317 486 aaPredicted RBP35.13■■■■□ 3.21
CHFR-218ENST00000540963 TRMT112Q9UI30 125 aaKnown RBP35.13■■■■□ 3.21
CHFR-218ENST00000540963 CDC37L1Q7L3B6 337 aa35.12■■■■□ 3.21
CHFR-218ENST00000540963 XAGE3Q8WTP9 111 aa35.12■■■■□ 3.21
CHFR-218ENST00000540963 GLIS2Q9BZE0 524 aaPredicted RBP35.12■■■■□ 3.21
CHFR-218ENST00000540963 BRPF1P55201 1214 aaPredicted RBP35.11■■■■□ 3.21
CHFR-218ENST00000540963 AOC2O75106 756 aa35.1■■■■□ 3.21
CHFR-218ENST00000540963 RAD17O75943 681 aa35.1■■■■□ 3.21
CHFR-218ENST00000540963 TMPOP42166 694 aaKnown RBP35.1■■■■□ 3.21
CHFR-218ENST00000540963 HIRAP54198 1017 aaPredicted RBP35.09■■■■□ 3.21
CHFR-218ENST00000540963 AIMP1Q12904 312 aaKnown RBP35.09■■■■□ 3.21
CHFR-218ENST00000540963 CNOT7Q9UIV1 285 aaKnown RBP35.09■■■■□ 3.21
CHFR-218ENST00000540963 TAF1P21675 1872 aa35.09■■■■□ 3.21
CHFR-218ENST00000540963 DUOX1Q9NRD9 1551 aa35.08■■■■□ 3.21
CHFR-218ENST00000540963 H7C1D1 291 aa35.07■■■■□ 3.2
CHFR-218ENST00000540963 DPF2Q92785 391 aa35.07■■■■□ 3.2
CHFR-218ENST00000540963 YDJCA8MPS7 323 aa35.06■■■■□ 3.2
CHFR-218ENST00000540963 RGS19P49795 217 aa35.06■■■■□ 3.2
CHFR-218ENST00000540963 DDX60Q8IY21 1712 aaKnown RBP35.06■■■■□ 3.2
CHFR-218ENST00000540963 FAM161AQ3B820 660 aa35.05■■■■□ 3.2
CHFR-218ENST00000540963 TRPM4Q8TD43 1214 aa35.05■■■■□ 3.2
CHFR-218ENST00000540963 CHL1O00533 1208 aa35.03■■■■□ 3.2
CHFR-218ENST00000540963 RALBP1Q15311 655 aa35.03■■■■□ 3.2
CHFR-218ENST00000540963 NECTIN2Q92692 538 aa35.03■■■■□ 3.2
CHFR-218ENST00000540963 CCDC85CA6NKD9 419 aa35.02■■■■□ 3.2
CHFR-218ENST00000540963 NOGQ13253 232 aa35.02■■■■□ 3.2
CHFR-218ENST00000540963 SF3B3Q15393 1217 aaKnown RBP35.02■■■■□ 3.2
CHFR-218ENST00000540963 MICALL2Q8IY33 904 aa35.02■■■■□ 3.2
CHFR-218ENST00000540963 PLBD2Q8NHP8 589 aa35.02■■■■□ 3.2
CHFR-218ENST00000540963 HOXB7P09629 217 aa35.01■■■■□ 3.2
CHFR-218ENST00000540963 WASHC4Q2M389 1173 aa35.01■■■■□ 3.2
CHFR-218ENST00000540963 ZNF408Q9H9D4 720 aa35.01■■■■□ 3.2
CHFR-218ENST00000540963 TSKSQ9UJT2 592 aa35.01■■■■□ 3.2
CHFR-218ENST00000540963 CASP8AP2Q9UKL3 1982 aa35■■■■□ 3.19
CHFR-218ENST00000540963 RPS12P25398 132 aaKnown RBP34.99■■■■□ 3.19
CHFR-218ENST00000540963 MLLT1Q03111 559 aaPredicted RBP34.99■■■■□ 3.19
CHFR-218ENST00000540963 ANKRD13DQ6ZTN6 518 aa34.98■■■■□ 3.19
CHFR-218ENST00000540963 ISCA1Q9BUE6 129 aa34.98■■■■□ 3.19
CHFR-218ENST00000540963 CHPF2Q9P2E5 772 aa34.98■■■■□ 3.19
CHFR-218ENST00000540963 NSFL1CQ9UNZ2 370 aaKnown RBP34.97■■■■□ 3.19
CHFR-218ENST00000540963 POLR2AP24928 1970 aaKnown RBP34.96■■■■□ 3.19
CHFR-218ENST00000540963 PSMD14O00487 310 aa34.96■■■■□ 3.19
CHFR-218ENST00000540963 USP48Q86UV5 1035 aa34.96■■■■□ 3.19
CHFR-218ENST00000540963 DBF4Q9UBU7 674 aaPredicted RBP34.96■■■■□ 3.19
CHFR-218ENST00000540963 SHTN1A0MZ66 631 aa34.95■■■■□ 3.19
CHFR-218ENST00000540963 HUNKP57058 714 aa34.95■■■■□ 3.19
CHFR-218ENST00000540963 HDGFL1Q5TGJ6 251 aa34.95■■■■□ 3.19
CHFR-218ENST00000540963 EYA3Q99504 573 aa34.95■■■■□ 3.19
CHFR-218ENST00000540963 ZBTB12Q9Y330 459 aaPredicted RBP34.95■■■■□ 3.19
CHFR-218ENST00000540963 SLC34A2O95436 690 aa34.94■■■■□ 3.18
CHFR-218ENST00000540963 TRIM28Q13263 835 aaKnown RBP34.94■■■■□ 3.18
CHFR-218ENST00000540963 KRT24Q2M2I5 525 aa34.94■■■■□ 3.18
CHFR-218ENST00000540963 CELF1Q92879 486 aaKnown RBP34.94■■■■□ 3.18
CHFR-218ENST00000540963 MCOLN1Q9GZU1 580 aa34.94■■■■□ 3.18
CHFR-218ENST00000540963 FAM89AQ96GI7 184 aa34.93■■■■□ 3.18
CHFR-218ENST00000540963 SAMD7Q7Z3H4 446 aa34.92■■■■□ 3.18
CHFR-218ENST00000540963 KRT26Q7Z3Y9 468 aa34.92■■■■□ 3.18
CHFR-218ENST00000540963 DBNDD1Q9H9R9 158 aa34.92■■■■□ 3.18
CHFR-218ENST00000540963 HYPKQ9NX55 129 aa34.92■■■■□ 3.18
CHFR-218ENST00000540963 POLLQ9UGP5 575 aa34.92■■■■□ 3.18
CHFR-218ENST00000540963 C6orf229H3BNL8 230 aa34.91■■■■□ 3.18
CHFR-218ENST00000540963 TRIM35Q9UPQ4 493 aa34.9■■■■□ 3.18
CHFR-218ENST00000540963 GPSM2P81274 684 aa34.89■■■■□ 3.18
CHFR-218ENST00000540963 NEUROD2Q15784 382 aa34.89■■■■□ 3.18
CHFR-218ENST00000540963 RGMBQ6NW40 437 aa34.89■■■■□ 3.18
CHFR-218ENST00000540963 C2orf69Q8N8R5 385 aa34.89■■■■□ 3.18
CHFR-218ENST00000540963 CCDC102AQ96A19 550 aa34.89■■■■□ 3.18
CHFR-218ENST00000540963 RUNDC1Q96C34 613 aa34.89■■■■□ 3.18
CHFR-218ENST00000540963 DCPSQ96C86 337 aaKnown RBP34.89■■■■□ 3.18
CHFR-218ENST00000540963 ECE2O60344 883 aa34.88■■■■□ 3.17
CHFR-218ENST00000540963 TBC1D10BQ4KMP7 808 aaPredicted RBP34.88■■■■□ 3.17
CHFR-218ENST00000540963 GBA2Q9HCG7 927 aaPredicted RBP34.88■■■■□ 3.17
CHFR-218ENST00000540963 LAS1LQ9Y4W2 734 aaKnown RBP34.88■■■■□ 3.17
CHFR-218ENST00000540963 ATP5J2-PTCD1G3V325 749 aa34.87■■■■□ 3.17
CHFR-218ENST00000540963 RIMBP2O15034 1052 aa34.87■■■■□ 3.17
CHFR-218ENST00000540963 HSP90B1P14625 803 aaKnown RBP34.87■■■■□ 3.17
CHFR-218ENST00000540963 RPS8P62241 208 aaKnown RBP34.87■■■■□ 3.17
CHFR-218ENST00000540963 SAGE1Q9NXZ1 904 aa34.87■■■■□ 3.17
CHFR-218ENST00000540963 FAM155AB1AL88 458 aaPredicted RBP34.86■■■■□ 3.17
CHFR-218ENST00000540963 IRS4O14654 1257 aaPredicted RBP34.86■■■■□ 3.17
CHFR-218ENST00000540963 DGKZQ13574 1117 aa34.86■■■■□ 3.17
CHFR-218ENST00000540963 TBC1D16Q8TBP0 767 aa34.86■■■■□ 3.17
CHFR-218ENST00000540963 PODXL2Q9NZ53 605 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms