RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 PRAMEF22A3QJZ6 481 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
CPT1A-206ENST00000540367 TPD52L1Q16890 204 aaPredicted RBP13.24□□□□□ -0.29
CPT1A-206ENST00000540367 ESCO1Q5FWF5 840 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
CPT1A-206ENST00000540367 JCADQ9P266 1359 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 CCDC144BQ3MJ40 725 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 CCDC144CPQ8IYA2 1237 aa13.24□□□□□ -0.29
CPT1A-206ENST00000540367 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
CPT1A-206ENST00000540367 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
CPT1A-206ENST00000540367 SARM1Q6SZW1 724 aa13.23□□□□□ -0.29
CPT1A-206ENST00000540367 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
CPT1A-206ENST00000540367 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
CPT1A-206ENST00000540367 DDX41Q9UJV9 622 aaKnown RBP13.23□□□□□ -0.29
CPT1A-206ENST00000540367 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
CPT1A-206ENST00000540367 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
CPT1A-206ENST00000540367 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
CPT1A-206ENST00000540367 NEMFO60524 1076 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 RESTQ13127 1097 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 TSGA10IPQ3SY00 556 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
CPT1A-206ENST00000540367 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
CPT1A-206ENST00000540367 IQCB1Q15051 598 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 LRRC8AQ8IWT6 810 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 MRFAP1L1Q96HT8 127 aa13.22□□□□□ -0.29
CPT1A-206ENST00000540367 STK3Q13188 491 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.29
CPT1A-206ENST00000540367 NBPF6Q5VWK0 638 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 NBPF4Q96M43 638 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 MYH15Q9Y2K3 1946 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 SASH1O94885 1247 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 TAF3Q5VWG9 929 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 EAF2Q96CJ1 260 aaPredicted RBP13.21□□□□□ -0.29
CPT1A-206ENST00000540367 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
CPT1A-206ENST00000540367 MAP3K2Q9Y2U5 619 aa13.21□□□□□ -0.29
CPT1A-206ENST00000540367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.29
CPT1A-206ENST00000540367 MORC2Q9Y6X9 1032 aaPredicted RBP13.21□□□□□ -0.29
CPT1A-206ENST00000540367 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 KIF18AQ8NI77 898 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 LTN1O94822 1766 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 JAK2O60674 1132 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 IGSF3O75054 1194 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 NYAP1Q6ZVC0 841 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 BRF1Q92994 677 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
CPT1A-206ENST00000540367 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
CPT1A-206ENST00000540367 CTAGE5O15320 804 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 KRT32Q14532 448 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 STX1AQ16623 288 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 ZNF771Q7L3S4 317 aaPredicted RBP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 ZNF589Q86UQ0 364 aaPredicted RBP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 TLR7Q9NYK1 1049 aaKnown RBP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 KSR2Q6VAB6 950 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
CPT1A-206ENST00000540367 ZNF592Q92610 1267 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 MRC1P22897 1456 aa13.19□□□□□ -0.3
CPT1A-206ENST00000540367 USP27XA6NNY8 438 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
CPT1A-206ENST00000540367 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 ANKARQ7Z5J8 1434 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
CPT1A-206ENST00000540367 H3BQV1 296 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 TAF5LO75529 589 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 FGD1P98174 961 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 TEFQ10587 303 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 ARID5BQ14865 1188 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 UTYO14607 1347 aa13.18□□□□□ -0.3
CPT1A-206ENST00000540367 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 SKILP12757 684 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 PSME1Q06323 249 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 KAZALD1Q96I82 304 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 ZNF215Q9UL58 517 aaPredicted RBP13.17□□□□□ -0.3
CPT1A-206ENST00000540367 GRM8O00222 908 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 SLFN14P0C7P3 912 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
CPT1A-206ENST00000540367 CCZ1BP86790 482 aa13.17□□□□□ -0.3
CPT1A-206ENST00000540367 CCZ1P86791 482 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms