RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 PRKCSHP14314 528 aaPredicted RBP8.5□□□□□ -1.05
CDH19-203ENST00000540086 GSPT1P15170 499 aaKnown RBP8.5□□□□□ -1.05
CDH19-203ENST00000540086 MX1P20591 662 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 PDE1AP54750 535 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 ZNF827Q17R98 1081 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 CCDC57Q2TAC2 916 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 BMP2KLQ5H9B9 411 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 TTLL11Q8NHH1 800 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 GREM2Q9H772 168 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 SSFA2P28290 1259 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 TFCP2Q12800 502 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 IFIT5Q13325 482 aaKnown RBP8.5□□□□□ -1.05
CDH19-203ENST00000540086 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 TTC22Q5TAA0 569 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 ILDR1Q86SU0 546 aaPredicted RBP8.5□□□□□ -1.05
CDH19-203ENST00000540086 CLASRPQ8N2M8 674 aaKnown RBP8.5□□□□□ -1.05
CDH19-203ENST00000540086 SETDB2Q96T68 719 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 PUS3Q9BZE2 481 aaKnown RBP8.5□□□□□ -1.05
CDH19-203ENST00000540086 TFCP2L1Q9NZI6 479 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 ITGA6P23229 1130 aa8.49□□□□□ -1.05
CDH19-203ENST00000540086 LRRC24Q50LG9 513 aa8.49□□□□□ -1.05
CDH19-203ENST00000540086 TAF7LQ5H9L4 462 aa8.49□□□□□ -1.05
CDH19-203ENST00000540086 AACSQ86V21 672 aa8.49□□□□□ -1.05
CDH19-203ENST00000540086 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
CDH19-203ENST00000540086 AKT1S1Q96B36 256 aa8.49□□□□□ -1.05
CDH19-203ENST00000540086 EYA2O00167 538 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 IFIT2P09913 472 aaKnown RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 GYS1P13807 737 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 GTF2E1P29083 439 aaPredicted RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 EZH2Q15910 746 aaKnown RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 C3orf67Q6ZVT6 689 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 EAF2Q96CJ1 260 aaPredicted RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 OSBPL3Q9H4L5 887 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 TLR7Q9NYK1 1049 aaKnown RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 STAP2Q9UGK3 403 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 SCN7AQ01118 1682 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 ABCC12Q96J65 1359 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 ANKRD18BA2A2Z9 1011 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 SEC24BO95487 1268 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 NFIXQ14938 502 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 CAMKK2Q96RR4 588 aa8.48□□□□□ -1.05
CDH19-203ENST00000540086 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
CDH19-203ENST00000540086 NUP98P52948 1817 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 ANKRD36CQ5JPF3 1778 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 BCORQ6W2J9 1755 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 TAF1LQ8IZX4 1826 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 CIAO1O76071 339 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 SDSP20132 328 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 HMGB2P26583 209 aaKnown RBP8.47□□□□□ -1.05
CDH19-203ENST00000540086 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
CDH19-203ENST00000540086 NYXQ9GZU5 481 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 TAOK2Q9UL54 1235 aa8.47□□□□□ -1.05
CDH19-203ENST00000540086 NPHP1O15259 732 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.05
CDH19-203ENST00000540086 CCDC152Q4G0S7 254 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 TNNI3KQ59H18 835 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 COL23A1Q86Y22 540 aaPredicted RBP8.46□□□□□ -1.05
CDH19-203ENST00000540086 PI4K2BQ8TCG2 481 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 ANO8Q9HCE9 1232 aaPredicted RBP8.46□□□□□ -1.05
CDH19-203ENST00000540086 FPGT-TNNI3KV9GXZ4 949 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 AOX1Q06278 1338 aa8.46□□□□□ -1.05
CDH19-203ENST00000540086 CARMIL3Q8ND23 1372 aa8.46□□□□□ -1.06
CDH19-203ENST00000540086 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
CDH19-203ENST00000540086 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
CDH19-203ENST00000540086 DEFB132Q7Z7B7 95 aa8.46□□□□□ -1.06
CDH19-203ENST00000540086 CNNM1Q9NRU3 951 aa8.46□□□□□ -1.06
CDH19-203ENST00000540086 ECHDC1Q9NTX5 307 aa8.46□□□□□ -1.06
CDH19-203ENST00000540086 CEP126Q9P2H0 1117 aa8.46□□□□□ -1.06
CDH19-203ENST00000540086 DBNLQ9UJU6 430 aaKnown RBP8.46□□□□□ -1.06
CDH19-203ENST00000540086 PNPLA7Q6ZV29 1317 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 TRIM6-TRIM34B2RNG4 842 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 CDC45O75419 566 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 METTL24Q5JXM2 366 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 SLC10A5Q5PT55 438 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 TBC1D9Q6ZT07 1266 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 GPATCH3Q96I76 525 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 TNS1Q9HBL0 1735 aaKnown RBP8.45□□□□□ -1.06
CDH19-203ENST00000540086 TTC41PQ6P2S7 1318 aa8.45□□□□□ -1.06
CDH19-203ENST00000540086 GLRX3O76003 335 aaKnown RBP8.44□□□□□ -1.06
CDH19-203ENST00000540086 TM4SF1P30408 202 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 BAG6P46379 1132 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 TIMM10P62072 90 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 DDR1Q08345 913 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 SF3B3Q15393 1217 aaKnown RBP8.44□□□□□ -1.06
CDH19-203ENST00000540086 PRR5LQ6MZQ0 368 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 NEUROD6Q96NK8 337 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 FBXO3Q9UK99 471 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 RIPOR2Q9Y4F9 1068 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 C4AP0C0L4 1744 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 RTL9Q8NET4 1388 aa8.44□□□□□ -1.06
CDH19-203ENST00000540086 RIC1Q4ADV7 1423 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms