RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 PPP1R1BQ9UD71 204 aaPredicted RBP16.45■□□□□ 0.22
RFX4-206ENST00000539967 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 UTYO14607 1347 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 KIF13BQ9NQT8 1826 aa16.43■□□□□ 0.22
RFX4-206ENST00000539967 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
RFX4-206ENST00000539967 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
RFX4-206ENST00000539967 SEC31BQ9NQW1 1179 aa16.43■□□□□ 0.22
RFX4-206ENST00000539967 ZBTB40Q9NUA8 1239 aa16.43■□□□□ 0.22
RFX4-206ENST00000539967 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
RFX4-206ENST00000539967 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
RFX4-206ENST00000539967 POLD1P28340 1107 aa16.42■□□□□ 0.22
RFX4-206ENST00000539967 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
RFX4-206ENST00000539967 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
RFX4-206ENST00000539967 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
RFX4-206ENST00000539967 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
RFX4-206ENST00000539967 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 MS4A1P11836 297 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 TTLL11Q8NHH1 800 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 ZNF594Q96JF6 807 aaPredicted RBP16.41■□□□□ 0.22
RFX4-206ENST00000539967 GREM2Q9H772 168 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 CDHR2Q9BYE9 1310 aa16.41■□□□□ 0.22
RFX4-206ENST00000539967 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 PDE8AO60658 829 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 DPEP1P16444 411 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 ST5P78524 1137 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
RFX4-206ENST00000539967 IBTKQ9P2D0 1353 aaPredicted RBP16.39■□□□□ 0.21
RFX4-206ENST00000539967 GNAI2P04899 355 aa16.39■□□□□ 0.21
RFX4-206ENST00000539967 CTSWP56202 376 aa16.39■□□□□ 0.21
RFX4-206ENST00000539967 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
RFX4-206ENST00000539967 C2CD5Q86YS7 1000 aa16.39■□□□□ 0.21
RFX4-206ENST00000539967 GNAI3P08754 354 aa16.38■□□□□ 0.21
RFX4-206ENST00000539967 KCNA3P22001 575 aa16.38■□□□□ 0.21
RFX4-206ENST00000539967 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
RFX4-206ENST00000539967 FHDC1Q9C0D6 1143 aaPredicted RBP16.38■□□□□ 0.21
RFX4-206ENST00000539967 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
RFX4-206ENST00000539967 CSF1RP07333 972 aa16.37■□□□□ 0.21
RFX4-206ENST00000539967 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
RFX4-206ENST00000539967 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
RFX4-206ENST00000539967 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
RFX4-206ENST00000539967 PLA2G12BQ9BX93 195 aa16.37■□□□□ 0.21
RFX4-206ENST00000539967 BRCA1P38398 1863 aaKnown RBP16.36■□□□□ 0.21
RFX4-206ENST00000539967 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
RFX4-206ENST00000539967 RFX5P48382 616 aaPredicted RBP16.36■□□□□ 0.21
RFX4-206ENST00000539967 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
RFX4-206ENST00000539967 ZNF622Q969S3 477 aaKnown RBP eCLIP16.36■□□□□ 0.21
RFX4-206ENST00000539967 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
RFX4-206ENST00000539967 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
RFX4-206ENST00000539967 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
RFX4-206ENST00000539967 SRGNP10124 158 aa16.35■□□□□ 0.21
RFX4-206ENST00000539967 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
RFX4-206ENST00000539967 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
RFX4-206ENST00000539967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
RFX4-206ENST00000539967 IGHDP01880 384 aa16.34■□□□□ 0.21
RFX4-206ENST00000539967 ITGA6P23229 1130 aa16.34■□□□□ 0.21
RFX4-206ENST00000539967 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
RFX4-206ENST00000539967 SRCAPQ6ZRS2 3230 aa16.33■□□□□ 0.21
RFX4-206ENST00000539967 SRGAP3O43295 1099 aa16.33■□□□□ 0.2
RFX4-206ENST00000539967 LRRC24Q50LG9 513 aa16.33■□□□□ 0.2
RFX4-206ENST00000539967 SIL1Q9H173 461 aa16.33■□□□□ 0.2
RFX4-206ENST00000539967 A0A1B0GUL6 1792 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 H0YIN7 160 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 SNAP23O00161 211 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 PDE6BP35913 854 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
RFX4-206ENST00000539967 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 BCL11AQ9H165 835 aa16.32■□□□□ 0.2
RFX4-206ENST00000539967 LRP5O75197 1615 aa16.31■□□□□ 0.2
RFX4-206ENST00000539967 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
RFX4-206ENST00000539967 NEFLP07196 543 aa16.31■□□□□ 0.2
RFX4-206ENST00000539967 PTPN12Q05209 780 aaKnown RBP16.31■□□□□ 0.2
RFX4-206ENST00000539967 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
RFX4-206ENST00000539967 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
RFX4-206ENST00000539967 APBB1O00213 710 aa16.3■□□□□ 0.2
RFX4-206ENST00000539967 NPR1P16066 1061 aa16.3■□□□□ 0.2
RFX4-206ENST00000539967 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
RFX4-206ENST00000539967 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
RFX4-206ENST00000539967 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
RFX4-206ENST00000539967 ANKRD18BA2A2Z9 1011 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
RFX4-206ENST00000539967 MTX1Q13505 466 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 B4GALNT3Q6L9W6 998 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 DDX46Q7L014 1031 aaKnown RBP16.29■□□□□ 0.2
RFX4-206ENST00000539967 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
RFX4-206ENST00000539967 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
RFX4-206ENST00000539967 EXOC6BQ9Y2D4 811 aa16.29■□□□□ 0.2
RFX4-206ENST00000539967 RPS8P62241 208 aaKnown RBP16.28■□□□□ 0.2
RFX4-206ENST00000539967 GRAPQ13588 217 aa16.28■□□□□ 0.2
RFX4-206ENST00000539967 PRPF40BQ6NWY9 871 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms