RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 TTLL11Q8NHH1 800 aa17■□□□□ 0.31
PRPF19-204ENST00000539960 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
PRPF19-204ENST00000539960 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
PRPF19-204ENST00000539960 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 CTSWP56202 376 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 RASSF7Q02833 373 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 SP8Q8IXZ3 490 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
PRPF19-204ENST00000539960 LMNB1P20700 586 aa16.98■□□□□ 0.31
PRPF19-204ENST00000539960 PRELPP51888 382 aa16.98■□□□□ 0.31
PRPF19-204ENST00000539960 RPS8P62241 208 aaKnown RBP16.98■□□□□ 0.31
PRPF19-204ENST00000539960 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
PRPF19-204ENST00000539960 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
PRPF19-204ENST00000539960 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
PRPF19-204ENST00000539960 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
PRPF19-204ENST00000539960 TAOK3Q9H2K8 898 aa16.98■□□□□ 0.31
PRPF19-204ENST00000539960 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
PRPF19-204ENST00000539960 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
PRPF19-204ENST00000539960 CSF1RP07333 972 aa16.97■□□□□ 0.31
PRPF19-204ENST00000539960 CCT4P50991 539 aaKnown RBP16.97■□□□□ 0.31
PRPF19-204ENST00000539960 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
PRPF19-204ENST00000539960 RNF181Q9P0P0 153 aa16.97■□□□□ 0.31
PRPF19-204ENST00000539960 UTYO14607 1347 aa16.96■□□□□ 0.31
PRPF19-204ENST00000539960 NBPF7P0C2Y1 421 aaPredicted RBP16.96■□□□□ 0.31
PRPF19-204ENST00000539960 FOXO4P98177 505 aa16.96■□□□□ 0.31
PRPF19-204ENST00000539960 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRPF19-204ENST00000539960 USP44Q9H0E7 712 aa16.96■□□□□ 0.31
PRPF19-204ENST00000539960 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.3
PRPF19-204ENST00000539960 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
PRPF19-204ENST00000539960 SLC51AQ86UW1 340 aa16.95■□□□□ 0.3
PRPF19-204ENST00000539960 PSMD1Q99460 953 aa16.95■□□□□ 0.3
PRPF19-204ENST00000539960 GREM2Q9H772 168 aa16.95■□□□□ 0.3
PRPF19-204ENST00000539960 CHD4Q14839 1912 aa16.95■□□□□ 0.3
PRPF19-204ENST00000539960 TRIM27P14373 513 aa16.94■□□□□ 0.3
PRPF19-204ENST00000539960 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
PRPF19-204ENST00000539960 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
PRPF19-204ENST00000539960 RTL9Q8NET4 1388 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 LAMB2P55268 1798 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 ANKRD18AQ8IVF6 992 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 MPNDQ8N594 471 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
PRPF19-204ENST00000539960 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
PRPF19-204ENST00000539960 CDC5LQ99459 802 aaKnown RBP16.93■□□□□ 0.3
PRPF19-204ENST00000539960 ZNF277Q9NRM2 450 aaPredicted RBP16.93■□□□□ 0.3
PRPF19-204ENST00000539960 ZNF784Q8NCA9 323 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-204ENST00000539960 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
PRPF19-204ENST00000539960 SNED1Q8TER0 1413 aa16.92■□□□□ 0.3
PRPF19-204ENST00000539960 ITGA6P23229 1130 aa16.91■□□□□ 0.3
PRPF19-204ENST00000539960 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
PRPF19-204ENST00000539960 DPP8Q6V1X1 898 aaPredicted RBP16.91■□□□□ 0.3
PRPF19-204ENST00000539960 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
PRPF19-204ENST00000539960 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
PRPF19-204ENST00000539960 BSDC1Q9NW68 430 aaPredicted RBP16.91■□□□□ 0.3
PRPF19-204ENST00000539960 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
PRPF19-204ENST00000539960 TNNQ9UQP3 1299 aa16.91■□□□□ 0.3
PRPF19-204ENST00000539960 ANKRD18BA2A2Z9 1011 aa16.9■□□□□ 0.3
PRPF19-204ENST00000539960 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
PRPF19-204ENST00000539960 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
PRPF19-204ENST00000539960 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
PRPF19-204ENST00000539960 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
PRPF19-204ENST00000539960 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
PRPF19-204ENST00000539960 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
PRPF19-204ENST00000539960 FER1L6Q2WGJ9 1857 aa16.9■□□□□ 0.3
PRPF19-204ENST00000539960 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
PRPF19-204ENST00000539960 IGHMBP2P38935 993 aaKnown RBP16.89■□□□□ 0.29
PRPF19-204ENST00000539960 GPSM2P81274 684 aa16.89■□□□□ 0.29
PRPF19-204ENST00000539960 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
PRPF19-204ENST00000539960 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
PRPF19-204ENST00000539960 TAF1P21675 1872 aa16.88■□□□□ 0.29
PRPF19-204ENST00000539960 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
PRPF19-204ENST00000539960 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
PRPF19-204ENST00000539960 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
PRPF19-204ENST00000539960 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
PRPF19-204ENST00000539960 PODXL2Q9NZ53 605 aa16.88■□□□□ 0.29
PRPF19-204ENST00000539960 MINPP1Q9UNW1 487 aa16.88■□□□□ 0.29
PRPF19-204ENST00000539960 SBF1O95248 1867 aa16.87■□□□□ 0.29
PRPF19-204ENST00000539960 UBTFL1P0CB47 393 aaPredicted RBP16.87■□□□□ 0.29
PRPF19-204ENST00000539960 DZIP1LQ8IYY4 767 aaKnown RBP16.87■□□□□ 0.29
PRPF19-204ENST00000539960 ANKRD44Q8N8A2 993 aa16.87■□□□□ 0.29
PRPF19-204ENST00000539960 JDP2Q8WYK2 163 aa16.87■□□□□ 0.29
PRPF19-204ENST00000539960 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
PRPF19-204ENST00000539960 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
PRPF19-204ENST00000539960 COL4A1P02462 1669 aa16.87■□□□□ 0.29
PRPF19-204ENST00000539960 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 GNAI3P08754 354 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 DPY19L2Q6NUT2 758 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 TMEM57Q8N5G2 664 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 ZNF526Q8TF50 670 aaPredicted RBP16.86■□□□□ 0.29
PRPF19-204ENST00000539960 MEIS3Q99687 375 aa16.86■□□□□ 0.29
PRPF19-204ENST00000539960 GLTPD2A6NH11 291 aa16.85■□□□□ 0.29
PRPF19-204ENST00000539960 PPIP5K2O43314 1243 aa16.85■□□□□ 0.29
PRPF19-204ENST00000539960 AOC3Q16853 763 aa16.85■□□□□ 0.29
PRPF19-204ENST00000539960 WASHC4Q2M389 1173 aa16.85■□□□□ 0.29
PRPF19-204ENST00000539960 FTSJ3Q8IY81 847 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms