RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 RAD21O60216 631 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.9
CCDC60-204ENST00000539847 PADI6Q6TGC4 694 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 CCDC146Q8IYE0 955 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 ZNF454Q8N9F8 522 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 CCDC97Q96F63 343 aaPredicted RBP9.46□□□□□ -0.9
CCDC60-204ENST00000539847 CFAP53Q96M91 514 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 PPP1R9BQ96SB3 815 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 MAP7D2Q96T17 732 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 EMILIN1Q9Y6C2 1016 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 KDRP35968 1356 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
CCDC60-204ENST00000539847 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 MMP10P09238 476 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 NUDT7P0C024 238 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 PHKG2P15735 406 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 ATP6V1AP38606 617 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 ITPK1Q13572 414 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
CCDC60-204ENST00000539847 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
CCDC60-204ENST00000539847 NAP1L5Q96NT1 182 aaPredicted RBP9.45□□□□□ -0.9
CCDC60-204ENST00000539847 EYA1Q99502 592 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 PDCL3Q9H2J4 239 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 ASAP1Q9ULH1 1129 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 DDX19BQ9UMR2 479 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 RTCBQ9Y3I0 505 aaKnown RBP9.45□□□□□ -0.9
CCDC60-204ENST00000539847 CNTNAP4Q9C0A0 1308 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 ITGB4P16144 1822 aa9.45□□□□□ -0.9
CCDC60-204ENST00000539847 POTEJP0CG39 1038 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 CCDC173Q0VFZ6 552 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 RAB3GAP1Q15042 981 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 ARSIQ5FYB1 569 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
CCDC60-204ENST00000539847 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 POM121Q96HA1 1249 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 DCAF5Q96JK2 942 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 ATG3Q9NT62 314 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 CCDC87Q9NVE4 849 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 KIF13BQ9NQT8 1826 aa9.44□□□□□ -0.9
CCDC60-204ENST00000539847 KIF20BQ96Q89 1820 aa9.43□□□□□ -0.9
CCDC60-204ENST00000539847 IPO8O15397 1037 aaKnown RBP9.43□□□□□ -0.9
CCDC60-204ENST00000539847 KCTD17Q8N5Z5 321 aa9.43□□□□□ -0.9
CCDC60-204ENST00000539847 DNAJC5GQ8N7S2 189 aa9.43□□□□□ -0.9
CCDC60-204ENST00000539847 ZNF526Q8TF50 670 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-204ENST00000539847 TRIM44Q96DX7 344 aaPredicted RBP9.43□□□□□ -0.9
CCDC60-204ENST00000539847 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
CCDC60-204ENST00000539847 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
CCDC60-204ENST00000539847 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
CCDC60-204ENST00000539847 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 OATP04181 439 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 RLBP1P12271 317 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 FSTL1Q12841 308 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 AMOTQ4VCS5 1084 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 MORC1Q86VD1 984 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 SP7Q8TDD2 431 aaPredicted RBP9.42□□□□□ -0.9
CCDC60-204ENST00000539847 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 PKNOX2Q96KN3 472 aa9.42□□□□□ -0.9
CCDC60-204ENST00000539847 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
CCDC60-204ENST00000539847 GOLGA6L22H0YM25 854 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 OFD1O75665 1012 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 GYS1P13807 737 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 HOXB3P14651 431 aaPredicted RBP9.41□□□□□ -0.9
CCDC60-204ENST00000539847 MCM5P33992 734 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 RFC4P35249 363 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 NUCB1Q02818 461 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 ALDH1L2Q3SY69 923 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 MTERF4Q7Z6M4 381 aaKnown RBP9.41□□□□□ -0.9
CCDC60-204ENST00000539847 TTC13Q8NBP0 860 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 PROCA1Q8NCQ7 364 aaPredicted RBP9.41□□□□□ -0.9
CCDC60-204ENST00000539847 ANP32BQ92688 251 aaKnown RBP9.41□□□□□ -0.9
CCDC60-204ENST00000539847 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
CCDC60-204ENST00000539847 EIF4A2Q14240 407 aaKnown RBP9.4□□□□□ -0.9
CCDC60-204ENST00000539847 PLEKHO1Q53GL0 409 aaPredicted RBP9.4□□□□□ -0.9
CCDC60-204ENST00000539847 ZSCAN30Q86W11 494 aa9.4□□□□□ -0.9
CCDC60-204ENST00000539847 JMYQ8N9B5 988 aa9.4□□□□□ -0.9
CCDC60-204ENST00000539847 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.9
CCDC60-204ENST00000539847 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.9
CCDC60-204ENST00000539847 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
CCDC60-204ENST00000539847 PIM2Q9P1W9 311 aa9.4□□□□□ -0.9
CCDC60-204ENST00000539847 KIAA1551Q9HCM1 1747 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 A0A0G2JLW4 131 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 DPEP1P16444 411 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 KCNA3P22001 575 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 ZNF445P59923 1031 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 KLHL40Q2TBA0 621 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 ATF7IPQ6VMQ6 1270 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
CCDC60-204ENST00000539847 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
CCDC60-204ENST00000539847 SMIM5Q71RC9 77 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms