RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 XAGE3Q8WTP9 111 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 DUOX1Q9NRD9 1551 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 SH3TC1Q8TE82 1336 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 AKAP11Q9UKA4 1901 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 TRAF5O00463 557 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 HCLS1P14317 486 aaPredicted RBP10.63□□□□□ -0.71
CD4-209ENST00000539492 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
CD4-209ENST00000539492 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
CD4-209ENST00000539492 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 GRAPQ13588 217 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 CST9Q5W186 159 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 CIAPIN1Q6FI81 312 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 CYP4F22Q6NT55 531 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 TMC4Q7Z404 712 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 GRAPLQ8TC17 118 aaPredicted RBP10.63□□□□□ -0.71
CD4-209ENST00000539492 NECTIN2Q92692 538 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 BEGAINQ9BUH8 593 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 TRMT112Q9UI30 125 aaKnown RBP10.63□□□□□ -0.71
CD4-209ENST00000539492 SCN9AQ15858 1988 aa10.63□□□□□ -0.71
CD4-209ENST00000539492 TNIP1Q15025 636 aa10.62□□□□□ -0.71
CD4-209ENST00000539492 GPR101Q96P66 508 aaPredicted RBP10.62□□□□□ -0.71
CD4-209ENST00000539492 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
CD4-209ENST00000539492 PSME4Q14997 1843 aa10.62□□□□□ -0.71
CD4-209ENST00000539492 CELF2O95319 508 aaKnown RBP10.61□□□□□ -0.71
CD4-209ENST00000539492 HOXB7P09629 217 aa10.61□□□□□ -0.71
CD4-209ENST00000539492 MAP2K2P36507 400 aa10.61□□□□□ -0.71
CD4-209ENST00000539492 GRM1Q13255 1194 aa10.61□□□□□ -0.71
CD4-209ENST00000539492 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
CD4-209ENST00000539492 ABHD8Q96I13 439 aa10.61□□□□□ -0.71
CD4-209ENST00000539492 PGAP2Q9UHJ9 254 aa10.61□□□□□ -0.71
CD4-209ENST00000539492 MYH3P11055 1940 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 CHL1O00533 1208 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 RAD17O75943 681 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 KRT24Q2M2I5 525 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 SAPCD2Q86UD0 394 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 PLBD2Q8NHP8 589 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 HHIPL1Q96JK4 782 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 GLIS2Q9BZE0 524 aaPredicted RBP10.6□□□□□ -0.71
CD4-209ENST00000539492 CHPF2Q9P2E5 772 aa10.6□□□□□ -0.71
CD4-209ENST00000539492 MYBBP1AQ9BQG0 1328 aaKnown RBP10.59□□□□□ -0.71
CD4-209ENST00000539492 YDJCA8MPS7 323 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 H7C1D1 291 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 CA12O43570 354 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 AOC2O75106 756 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 CDC37L1Q7L3B6 337 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 CCDC146Q8IYE0 955 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 ISCA1Q9BUE6 129 aa10.59□□□□□ -0.71
CD4-209ENST00000539492 COL4A1P02462 1669 aa10.58□□□□□ -0.72
CD4-209ENST00000539492 HIRAP54198 1017 aaPredicted RBP10.58□□□□□ -0.72
CD4-209ENST00000539492 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
CD4-209ENST00000539492 ANKRD13DQ6ZTN6 518 aa10.58□□□□□ -0.72
CD4-209ENST00000539492 MICALL2Q8IY33 904 aa10.58□□□□□ -0.72
CD4-209ENST00000539492 DPF2Q92785 391 aa10.58□□□□□ -0.72
CD4-209ENST00000539492 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
CD4-209ENST00000539492 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
CD4-209ENST00000539492 CNOT7Q9UIV1 285 aaKnown RBP10.58□□□□□ -0.72
CD4-209ENST00000539492 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
CD4-209ENST00000539492 LAS1LQ9Y4W2 734 aaKnown RBP10.58□□□□□ -0.72
CD4-209ENST00000539492 SHTN1A0MZ66 631 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 PSMD14O00487 310 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
CD4-209ENST00000539492 WDR43Q15061 677 aaKnown RBP eCLIP10.57□□□□□ -0.72
CD4-209ENST00000539492 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 CELF1Q92879 486 aaKnown RBP10.57□□□□□ -0.72
CD4-209ENST00000539492 FAM89AQ96GI7 184 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 ZNF408Q9H9D4 720 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 DBNDD1Q9H9R9 158 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 NSFL1CQ9UNZ2 370 aaKnown RBP10.57□□□□□ -0.72
CD4-209ENST00000539492 CACNA1FO60840 1977 aa10.57□□□□□ -0.72
CD4-209ENST00000539492 ATP5J2-PTCD1G3V325 749 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 RPS12P25398 132 aaKnown RBP10.56□□□□□ -0.72
CD4-209ENST00000539492 TRIM28Q13263 835 aaKnown RBP10.56□□□□□ -0.72
CD4-209ENST00000539492 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 ZNF428Q96B54 188 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 EYA3Q99504 573 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 SPEF2Q9C093 1822 aa10.56□□□□□ -0.72
CD4-209ENST00000539492 IRS4O14654 1257 aaPredicted RBP10.55□□□□□ -0.72
CD4-209ENST00000539492 ECE2O60344 883 aa10.55□□□□□ -0.72
CD4-209ENST00000539492 HSP90B1P14625 803 aaKnown RBP10.55□□□□□ -0.72
CD4-209ENST00000539492 HUNKP57058 714 aa10.55□□□□□ -0.72
CD4-209ENST00000539492 GPSM2P81274 684 aa10.55□□□□□ -0.72
CD4-209ENST00000539492 NOGQ13253 232 aa10.55□□□□□ -0.72
CD4-209ENST00000539492 USP48Q86UV5 1035 aa10.55□□□□□ -0.72
CD4-209ENST00000539492 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
CD4-209ENST00000539492 RTL9Q8NET4 1388 aa10.54□□□□□ -0.72
CD4-209ENST00000539492 CCDC85CA6NKD9 419 aa10.54□□□□□ -0.72
CD4-209ENST00000539492 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
CD4-209ENST00000539492 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
CD4-209ENST00000539492 GOLGA2Q08379 1002 aa10.54□□□□□ -0.72
CD4-209ENST00000539492 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
CD4-209ENST00000539492 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms