RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 COPS2P61201 443 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 TEFQ10587 303 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 NMRK2Q9NPI5 230 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 STARD3NLO95772 234 aa12.12□□□□□ -0.47
CCDC144NL-203ENST00000539484 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
CCDC144NL-203ENST00000539484 TM4SF1P30408 202 aa12.12□□□□□ -0.47
CCDC144NL-203ENST00000539484 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
CCDC144NL-203ENST00000539484 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
CCDC144NL-203ENST00000539484 DLEC1Q9Y238 1755 aa12.12□□□□□ -0.47
CCDC144NL-203ENST00000539484 A0A087WZG4 1122 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 SERPINB2P05120 415 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 NFIXQ14938 502 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 TRIM67Q6ZTA4 783 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
CCDC144NL-203ENST00000539484 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 NPHP1O15259 732 aa12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 DGAT1O75907 488 aa12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 SLC19A1P41440 591 aa12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 BICDL1Q6ZP65 573 aa12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
CCDC144NL-203ENST00000539484 POTECB2RU33 542 aa12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 H0YIN7 160 aa12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 SIPA1L3O60292 1781 aaPredicted RBP12.09□□□□□ -0.47
CCDC144NL-203ENST00000539484 DICER1Q9UPY3 1922 aaKnown RBP12.08□□□□□ -0.48
CCDC144NL-203ENST00000539484 FSTL1Q12841 308 aa12.08□□□□□ -0.48
CCDC144NL-203ENST00000539484 C2CD5Q86YS7 1000 aa12.08□□□□□ -0.48
CCDC144NL-203ENST00000539484 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 LMNB1P20700 586 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 RASSF7Q02833 373 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 TIAM2Q8IVF5 1701 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
CCDC144NL-203ENST00000539484 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 PDE6BP35913 854 aa12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 PDIA6Q15084 440 aa12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 ZNF622Q969S3 477 aaKnown RBP eCLIP12.06□□□□□ -0.487e-10■□□□□ 8.5
CCDC144NL-203ENST00000539484 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
CCDC144NL-203ENST00000539484 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 SMC1BQ8NDV3 1235 aa12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 IL17REQ8NFR9 667 aa12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 CEP350Q5VT06 3117 aa12.05□□□□□ -0.48
CCDC144NL-203ENST00000539484 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
CCDC144NL-203ENST00000539484 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
CCDC144NL-203ENST00000539484 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
CCDC144NL-203ENST00000539484 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
CCDC144NL-203ENST00000539484 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
CCDC144NL-203ENST00000539484 CARMIL3Q8ND23 1372 aa12.04□□□□□ -0.48
CCDC144NL-203ENST00000539484 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 GLTPD2A6NH11 291 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 ST5P78524 1137 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 TREML4Q6UXN2 200 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
CCDC144NL-203ENST00000539484 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 NEFMP07197 916 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 SPRYD7Q5W111 196 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 DNAJC5GQ8N7S2 189 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 CNBD1Q8NA66 436 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 KLRG1Q96E93 195 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
CCDC144NL-203ENST00000539484 COL11A2P13942 1736 aaPredicted RBP12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 ARFGEF2Q9Y6D5 1785 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 A1BGP04217 495 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 PRR20EP86478 221 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 PRR20CP86479 221 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 PRR20DP86480 221 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 PRR20BP86481 221 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 PRR20AP86496 221 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 SWT1Q5T5J6 900 aaKnown RBP12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
CCDC144NL-203ENST00000539484 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms