RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 ATP6V0A2Q9Y487 856 aa24.44■■□□□ 1.5
LINC00943-205ENST00000539315 PPIP5K2O43314 1243 aa24.43■■□□□ 1.5
LINC00943-205ENST00000539315 CENPBP07199 599 aaPredicted RBP24.43■■□□□ 1.5
LINC00943-205ENST00000539315 AOC3Q16853 763 aa24.43■■□□□ 1.5
LINC00943-205ENST00000539315 NIM1KQ8IY84 436 aa24.43■■□□□ 1.5
LINC00943-205ENST00000539315 ABCC4O15439 1325 aa24.42■■□□□ 1.5
LINC00943-205ENST00000539315 HSPA8P11142 646 aaKnown RBP24.42■■□□□ 1.5
LINC00943-205ENST00000539315 USP50Q70EL3 339 aaPredicted RBP24.42■■□□□ 1.5
LINC00943-205ENST00000539315 TRPM7Q96QT4 1865 aa24.41■■□□□ 1.5
LINC00943-205ENST00000539315 TRAF5O00463 557 aa24.41■■□□□ 1.5
LINC00943-205ENST00000539315 CST9Q5W186 159 aa24.41■■□□□ 1.5
LINC00943-205ENST00000539315 RTFDC1Q9BY42 306 aaPredicted RBP24.41■■□□□ 1.5
LINC00943-205ENST00000539315 CHL1O00533 1208 aa24.4■■□□□ 1.5
LINC00943-205ENST00000539315 ZNF853P0CG23 659 aa24.4■■□□□ 1.5
LINC00943-205ENST00000539315 TRMT2AQ8IZ69 625 aaKnown RBP24.4■■□□□ 1.5
LINC00943-205ENST00000539315 VPS33BQ9H267 617 aa24.4■■□□□ 1.5
LINC00943-205ENST00000539315 SPINK5Q9NQ38 1064 aaPredicted RBP24.4■■□□□ 1.5
LINC00943-205ENST00000539315 MAP2K1Q02750 393 aaPredicted RBP24.39■■□□□ 1.49
LINC00943-205ENST00000539315 CXCL9Q07325 125 aa24.39■■□□□ 1.49
LINC00943-205ENST00000539315 COPS6Q7L5N1 327 aa24.39■■□□□ 1.49
LINC00943-205ENST00000539315 NLRP10Q86W26 655 aa24.39■■□□□ 1.49
LINC00943-205ENST00000539315 GPRC5DQ9NZD1 345 aa24.39■■□□□ 1.49
LINC00943-205ENST00000539315 ZNRF3Q9ULT6 936 aa24.39■■□□□ 1.49
LINC00943-205ENST00000539315 LAMB2P55268 1798 aa24.39■■□□□ 1.49
LINC00943-205ENST00000539315 HCLS1P14317 486 aaPredicted RBP24.38■■□□□ 1.49
LINC00943-205ENST00000539315 NECTIN2Q92692 538 aa24.38■■□□□ 1.49
LINC00943-205ENST00000539315 TAF1P21675 1872 aa24.37■■□□□ 1.49
LINC00943-205ENST00000539315 BBOX1O75936 387 aa24.37■■□□□ 1.49
LINC00943-205ENST00000539315 SP8Q8IXZ3 490 aa24.37■■□□□ 1.49
LINC00943-205ENST00000539315 XAGE3Q8WTP9 111 aa24.37■■□□□ 1.49
LINC00943-205ENST00000539315 CAPNS2Q96L46 248 aa24.37■■□□□ 1.49
LINC00943-205ENST00000539315 ADARB2Q9NS39 739 aaKnown RBP24.37■■□□□ 1.49
LINC00943-205ENST00000539315 AIMP1Q12904 312 aaKnown RBP24.36■■□□□ 1.49
LINC00943-205ENST00000539315 DUSP27Q5VZP5 1158 aa24.36■■□□□ 1.49
LINC00943-205ENST00000539315 CYP4F22Q6NT55 531 aa24.36■■□□□ 1.49
LINC00943-205ENST00000539315 TMX4Q9H1E5 349 aaPredicted RBP24.36■■□□□ 1.49
LINC00943-205ENST00000539315 ANKRD36CQ5JPF3 1778 aa24.36■■□□□ 1.49
LINC00943-205ENST00000539315 KRT24Q2M2I5 525 aa24.35■■□□□ 1.49
LINC00943-205ENST00000539315 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
LINC00943-205ENST00000539315 MBIPQ9NS73 344 aa24.35■■□□□ 1.49
LINC00943-205ENST00000539315 GMPSP49915 693 aaPredicted RBP24.34■■□□□ 1.49
LINC00943-205ENST00000539315 TCIRG1Q13488 830 aa24.34■■□□□ 1.49
LINC00943-205ENST00000539315 HSP90AB3PQ58FF7 597 aa24.34■■□□□ 1.49
LINC00943-205ENST00000539315 DPP8Q6V1X1 898 aaPredicted RBP24.34■■□□□ 1.49
LINC00943-205ENST00000539315 MPNDQ8N594 471 aa24.34■■□□□ 1.49
LINC00943-205ENST00000539315 TSR2Q969E8 191 aaKnown RBP24.34■■□□□ 1.49
LINC00943-205ENST00000539315 TLL2Q9Y6L7 1015 aa24.34■■□□□ 1.49
LINC00943-205ENST00000539315 THSD7BQ9C0I4 1608 aa24.33■■□□□ 1.49
LINC00943-205ENST00000539315 KIAA2012Q0VF49 1180 aa24.33■■□□□ 1.49
LINC00943-205ENST00000539315 FANCIQ9NVI1 1328 aa24.33■■□□□ 1.48
LINC00943-205ENST00000539315 ECE1P42892 770 aa24.32■■□□□ 1.48
LINC00943-205ENST00000539315 HIRAP54198 1017 aaPredicted RBP24.32■■□□□ 1.48
LINC00943-205ENST00000539315 GRAPQ13588 217 aa24.32■■□□□ 1.48
LINC00943-205ENST00000539315 CIAPIN1Q6FI81 312 aa24.32■■□□□ 1.48
LINC00943-205ENST00000539315 GRAPLQ8TC17 118 aaPredicted RBP24.32■■□□□ 1.48
LINC00943-205ENST00000539315 GPR101Q96P66 508 aaPredicted RBP24.32■■□□□ 1.48
LINC00943-205ENST00000539315 PGAP2Q9UHJ9 254 aa24.32■■□□□ 1.48
LINC00943-205ENST00000539315 TRMT112Q9UI30 125 aaKnown RBP24.32■■□□□ 1.48
LINC00943-205ENST00000539315 RAD17O75943 681 aa24.31■■□□□ 1.48
LINC00943-205ENST00000539315 GRM1Q13255 1194 aa24.31■■□□□ 1.48
LINC00943-205ENST00000539315 PAXIP1Q6ZW49 1069 aaPredicted RBP24.31■■□□□ 1.48
LINC00943-205ENST00000539315 DDX46Q7L014 1031 aaKnown RBP24.31■■□□□ 1.48
LINC00943-205ENST00000539315 ZNF428Q96B54 188 aa24.31■■□□□ 1.48
LINC00943-205ENST00000539315 SH3TC1Q8TE82 1336 aa24.31■■□□□ 1.48
LINC00943-205ENST00000539315 YDJCA8MPS7 323 aa24.3■■□□□ 1.48
LINC00943-205ENST00000539315 ABHD8Q96I13 439 aa24.3■■□□□ 1.48
LINC00943-205ENST00000539315 GLIS2Q9BZE0 524 aaPredicted RBP24.3■■□□□ 1.48
LINC00943-205ENST00000539315 SHTN1A0MZ66 631 aa24.29■■□□□ 1.48
LINC00943-205ENST00000539315 AOC2O75106 756 aa24.29■■□□□ 1.48
LINC00943-205ENST00000539315 CELF2O95319 508 aaKnown RBP24.29■■□□□ 1.48
LINC00943-205ENST00000539315 EXOSC9Q06265 439 aaKnown RBP24.29■■□□□ 1.48
LINC00943-205ENST00000539315 SAPCD2Q86UD0 394 aa24.29■■□□□ 1.48
LINC00943-205ENST00000539315 TRPM4Q8TD43 1214 aa24.29■■□□□ 1.48
LINC00943-205ENST00000539315 CHPF2Q9P2E5 772 aa24.28■■□□□ 1.48
LINC00943-205ENST00000539315 DUOX1Q9NRD9 1551 aa24.28■■□□□ 1.48
LINC00943-205ENST00000539315 TNIP1Q15025 636 aa24.27■■□□□ 1.48
LINC00943-205ENST00000539315 CDHR2Q9BYE9 1310 aa24.27■■□□□ 1.48
LINC00943-205ENST00000539315 CT47B1P0C2W7 299 aaPredicted RBP24.26■■□□□ 1.47
LINC00943-205ENST00000539315 MAP2K2P36507 400 aa24.26■■□□□ 1.47
LINC00943-205ENST00000539315 ZC3H15Q8WU90 426 aaKnown RBP24.26■■□□□ 1.47
LINC00943-205ENST00000539315 BCL2L13Q9BXK5 485 aa24.26■■□□□ 1.47
LINC00943-205ENST00000539315 CNOT7Q9UIV1 285 aaKnown RBP24.26■■□□□ 1.47
LINC00943-205ENST00000539315 POLR2AP24928 1970 aaKnown RBP24.25■■□□□ 1.47
LINC00943-205ENST00000539315 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
LINC00943-205ENST00000539315 ISCA1Q9BUE6 129 aa24.25■■□□□ 1.47
LINC00943-205ENST00000539315 CHMP4AQ9BY43 222 aa24.25■■□□□ 1.47
LINC00943-205ENST00000539315 TSKSQ9UJT2 592 aa24.25■■□□□ 1.47
LINC00943-205ENST00000539315 TMC4Q7Z404 712 aa24.24■■□□□ 1.47
LINC00943-205ENST00000539315 PLBD2Q8NHP8 589 aa24.24■■□□□ 1.47
LINC00943-205ENST00000539315 CELF1Q92879 486 aaKnown RBP24.24■■□□□ 1.47
LINC00943-205ENST00000539315 FAM89AQ96GI7 184 aa24.24■■□□□ 1.47
LINC00943-205ENST00000539315 BEGAINQ9BUH8 593 aa24.24■■□□□ 1.47
LINC00943-205ENST00000539315 COL4A1P02462 1669 aa24.24■■□□□ 1.47
LINC00943-205ENST00000539315 LRRC37AA6NMS7 1700 aa24.24■■□□□ 1.47
LINC00943-205ENST00000539315 SF3B3Q15393 1217 aaKnown RBP24.23■■□□□ 1.47
LINC00943-205ENST00000539315 ZBTB12Q9Y330 459 aaPredicted RBP24.23■■□□□ 1.47
LINC00943-205ENST00000539315 CASP8AP2Q9UKL3 1982 aa24.23■■□□□ 1.47
LINC00943-205ENST00000539315 TWISTNBQ3B726 338 aaPredicted RBP24.22■■□□□ 1.47
LINC00943-205ENST00000539315 HDGFL1Q5TGJ6 251 aa24.22■■□□□ 1.47
LINC00943-205ENST00000539315 DLK2Q6UY11 383 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms