RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 COX4I2Q96KJ9 171 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 TRERF1Q96PN7 1200 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 TRIM56Q9BRZ2 755 aaKnown RBP1.7□□□□□ -2.14
HIF1A-204ENST00000539097 HCN4Q9Y3Q4 1203 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 ATAD2Q6PL18 1390 aa1.7□□□□□ -2.14
HIF1A-204ENST00000539097 TRPA1O75762 1119 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 VSIG8P0DPA2 414 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 RELBQ01201 579 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 KANK3Q6NY19 840 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 RHBDD1Q8TEB9 315 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 INSM2Q96T92 566 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 OSBPL7Q9BZF2 842 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 LATS2Q9NRM7 1088 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 DMGDHQ9UI17 866 aaKnown RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 AK5Q9Y6K8 562 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 SENP3-EIF4A1A0A087X0R7 540 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 GDF9O60383 454 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 ALDH1A1P00352 501 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 CAP2P40123 477 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 FANCCQ00597 558 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 L3MBTL2Q969R5 705 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 TSEN34Q9BSV6 310 aaKnown RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 TOR4AQ9NXH8 423 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 FOXD3Q9UJU5 478 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 POLIQ9UNA4 740 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 A6NJY4 79 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 SMPD1P17405 629 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 ZC3H6P61129 1189 aaKnown RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 FOXC1Q12948 553 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 DGKZQ13574 1117 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 C16orf46Q6P387 395 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 ZNF662Q6ZS27 426 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 C19orf47Q8N9M1 422 aaKnown RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 EPS8L3Q8TE67 593 aaKnown RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 HHIPQ96QV1 700 aa1.69□□□□□ -2.14
HIF1A-204ENST00000539097 DUSP9Q99956 384 aaKnown RBP1.69□□□□□ -2.14
HIF1A-204ENST00000539097 ADARB2-AS1A8MUL3 147 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 MAPK8P45983 427 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 PHKA2P46019 1235 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 NNTQ13423 1086 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 SPRYD7Q5W111 196 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 CCDC116Q8IYX3 515 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ALDH16A1Q8IZ83 802 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 DTWD1Q8N5C7 304 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 UBXN4Q92575 508 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 EMILIN2Q9BXX0 1053 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 COPRSQ9NQ92 184 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 TYW1Q9NV66 732 aaKnown RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 STIM2Q9P246 746 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 PARP2Q9UGN5 583 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 H7C1W4 665 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 SPINT1O43278 529 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 IMPDH2P12268 514 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 MAP3K10Q02779 954 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 JMYQ8N9B5 988 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 FBXO41Q8TF61 875 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 DRC1Q96MC2 740 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ZCCHC2Q9C0B9 1178 aaKnown RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 EPN3Q9H201 632 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ACBD3Q9H3P7 528 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 GEMIN8Q9NWZ8 242 aaKnown RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 TMEM63CQ9P1W3 806 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 DYRK1BQ9Y463 629 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 KCNMB2Q9Y691 235 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 TGFBR3LH3BV60 316 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 FBXO24O75426 580 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ZIC2O95409 532 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 CYP2E1P05181 493 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ENDOUP21128 410 aaKnown RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ATP2B2Q01814 1243 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 DNM1Q05193 864 aaKnown RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 RASIP1Q5U651 963 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 PEAR1Q5VY43 1037 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 GIMAP6Q6P9H5 292 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 RAB44Q7Z6P3 723 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ZNF654Q8IZM8 581 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 DDX54Q8TDD1 881 aaKnown RBP1.68□□□□□ -2.14
HIF1A-204ENST00000539097 NIF3L1Q9GZT8 377 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 ADAM19Q9H013 955 aa1.68□□□□□ -2.14
HIF1A-204ENST00000539097 A0A1B0GTH6 734 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PPP1R12BO60237 982 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CENPCQ03188 943 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 UBAP2LQ14157 1087 aaKnown RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 C4orf17Q53FE4 359 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 GNASQ5JWF2 1037 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 NT5DC4Q86YG4 428 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 GPR152Q8TDT2 470 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 NUDT16Q96DE0 195 aaKnown RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CSRNP1Q96S65 589 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 TINF2Q9BSI4 451 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CEP44Q9C0F1 390 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CHRDQ9H2X0 955 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 ESF1Q9H501 851 aaKnown RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 STRN4Q9NRL3 753 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 SAMM50Q9Y512 469 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 METTL12A8MUP2 240 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 POLR3DP05423 398 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 TLR1Q15399 786 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 TESK1Q15569 626 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PIK3R5Q8WYR1 880 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms