RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 FAM89AQ96GI7 184 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 ACSBG1Q96GR2 724 aa24.88■■□□□ 1.57
SMPDL3A-203ENST00000539041 MED23Q9ULK4 1368 aa24.87■■□□□ 1.57
SMPDL3A-203ENST00000539041 CUL4AQ13619 759 aa24.87■■□□□ 1.57
SMPDL3A-203ENST00000539041 HAUS7Q99871 368 aa24.87■■□□□ 1.57
SMPDL3A-203ENST00000539041 CSF1RP07333 972 aa24.86■■□□□ 1.57
SMPDL3A-203ENST00000539041 RASEFQ8IZ41 740 aa24.86■■□□□ 1.57
SMPDL3A-203ENST00000539041 ZGPATQ8N5A5 531 aaKnown RBP24.86■■□□□ 1.57
SMPDL3A-203ENST00000539041 KCNB2Q92953 911 aa24.86■■□□□ 1.57
SMPDL3A-203ENST00000539041 MYH7P12883 1935 aa24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 A0A0D9SFI3 127 aa24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 A0A0G2JS52 829 aa24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 GPTP24298 496 aa24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 DZIP3Q86Y13 1208 aaKnown RBP24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 BCORQ6W2J9 1755 aa24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 EDC3Q96F86 508 aaKnown RBP24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 NEUROD6Q96NK8 337 aa24.85■■□□□ 1.57
SMPDL3A-203ENST00000539041 LAMB2P55268 1798 aa24.84■■□□□ 1.57
SMPDL3A-203ENST00000539041 CYP2E1P05181 493 aaPredicted RBP24.84■■□□□ 1.57
SMPDL3A-203ENST00000539041 PTMSP20962 102 aa24.84■■□□□ 1.57
SMPDL3A-203ENST00000539041 CLEC17AQ6ZS10 378 aa24.84■■□□□ 1.57
SMPDL3A-203ENST00000539041 PUS3Q9BZE2 481 aaKnown RBP24.84■■□□□ 1.57
SMPDL3A-203ENST00000539041 JCADQ9P266 1359 aa24.84■■□□□ 1.57
SMPDL3A-203ENST00000539041 UBAP1LF5GYI3 381 aa24.83■■□□□ 1.57
SMPDL3A-203ENST00000539041 NECTIN1Q15223 517 aa24.83■■□□□ 1.57
SMPDL3A-203ENST00000539041 MAP4K1Q92918 833 aa24.83■■□□□ 1.57
SMPDL3A-203ENST00000539041 DNAJC2Q99543 621 aaKnown RBP24.83■■□□□ 1.57
SMPDL3A-203ENST00000539041 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.57
SMPDL3A-203ENST00000539041 ATP6V1AP38606 617 aa24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 PRPF40BQ6NWY9 871 aaKnown RBP24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 INTS4Q96HW7 963 aaKnown RBP24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 TTC14Q96N46 770 aa24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 CEP126Q9P2H0 1117 aa24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 RBM8AQ9Y5S9 174 aaKnown RBP24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 EIF5P55010 431 aaKnown RBP24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 NOL8Q76FK4 1167 aaKnown RBP24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 TBC1D2BQ9UPU7 963 aa24.82■■□□□ 1.56
SMPDL3A-203ENST00000539041 PALLDQ8WX93 1383 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 LOC102724428A0A0B4J2F2 783 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 A0A1B0GUL7 405 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 TRAK2O60296 914 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 SIK1P57059 783 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 TIMM10P62072 90 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 IFIT5Q13325 482 aaKnown RBP24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 TAF7LQ5H9L4 462 aa24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 INTS5Q6P9B9 1019 aaKnown RBP24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 DDX60Q8IY21 1712 aaKnown RBP24.81■■□□□ 1.56
SMPDL3A-203ENST00000539041 KCNJ4P48050 445 aa24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 TM6SF1Q9BZW5 370 aa24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 CRKLP46109 303 aaKnown RBP24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 ZNF34Q8IZ26 560 aa24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 TRMT112Q9UI30 125 aaKnown RBP24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 AKAP2Q9Y2D5 859 aa24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 NDUFB9Q9Y6M9 179 aa24.8■■□□□ 1.56
SMPDL3A-203ENST00000539041 BCL9LQ86UU0 1499 aa24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 ZKSCAN1P17029 563 aaPredicted RBP24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 CTSWP56202 376 aa24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 CREB3L3Q68CJ9 461 aa24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 SYNE4Q8N205 404 aa24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 KBTBD3Q8NAB2 608 aa24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 SMARCC1Q92922 1105 aaPredicted RBP24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 CCDC85AQ96PX6 553 aaPredicted RBP24.79■■□□□ 1.56
SMPDL3A-203ENST00000539041 IRS4O14654 1257 aaPredicted RBP24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 CASTP20810 708 aaKnown RBP24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 VPS72Q15906 364 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 TICAM2Q86XR7 235 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 TTLL11Q8NHH1 800 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 LAMA4Q16363 1823 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 ARAP2Q8WZ64 1704 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 CASZ1Q86V15 1759 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 RIC1Q4ADV7 1423 aa24.78■■□□□ 1.56
SMPDL3A-203ENST00000539041 BAG4O95429 457 aaKnown RBP24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 ZNF589Q86UQ0 364 aaPredicted RBP24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 JAKMIP1Q96N16 626 aaKnown RBP24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 PAG1Q9NWQ8 432 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 UBN2Q6ZU65 1347 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 LRP5O75197 1615 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 GOLGA6L22H0YM25 854 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 PDE8AO60658 829 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 AK2P54819 239 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 ITPK1Q13572 414 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 DDX46Q7L014 1031 aaKnown RBP24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 NGLY1Q96IV0 654 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 C8orf37Q96NL8 207 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 ZSWIM6Q9HCJ5 1215 aa24.77■■□□□ 1.56
SMPDL3A-203ENST00000539041 AKAP11Q9UKA4 1901 aa24.76■■□□□ 1.55
SMPDL3A-203ENST00000539041 SLC27A2O14975 620 aa24.76■■□□□ 1.55
SMPDL3A-203ENST00000539041 IFIT1P09914 478 aaKnown RBP24.76■■□□□ 1.55
SMPDL3A-203ENST00000539041 PKP1Q13835 747 aa24.76■■□□□ 1.55
SMPDL3A-203ENST00000539041 FAM98CQ17RN3 349 aaKnown RBP24.76■■□□□ 1.55
SMPDL3A-203ENST00000539041 RNF20Q5VTR2 975 aa24.76■■□□□ 1.55
SMPDL3A-203ENST00000539041 ANKRD18BA2A2Z9 1011 aa24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 ITGA6P23229 1130 aa24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 ADCK5Q3MIX3 580 aa24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 CYP46A1Q9Y6A2 500 aa24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 SH3TC1Q8TE82 1336 aa24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 RPAP1Q9BWH6 1393 aaPredicted RBP24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 BTAF1O14981 1849 aa24.75■■□□□ 1.55
SMPDL3A-203ENST00000539041 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms