RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 MKNK1Q9BUB5 465 aa9.24□□□□□ -0.93
SSPN-206ENST00000539019 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
SSPN-206ENST00000539019 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
SSPN-206ENST00000539019 SLC6A14Q9UN76 642 aa9.24□□□□□ -0.93
SSPN-206ENST00000539019 SMARCA2P51531 1590 aa9.23□□□□□ -0.93
SSPN-206ENST00000539019 C1QTNF9BB2RNN3 333 aa9.23□□□□□ -0.93
SSPN-206ENST00000539019 TARSP26639 723 aaKnown RBP9.23□□□□□ -0.93
SSPN-206ENST00000539019 ZFATQ9P243 1243 aa9.23□□□□□ -0.93
SSPN-206ENST00000539019 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
SSPN-206ENST00000539019 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
SSPN-206ENST00000539019 HMGXB3Q12766 1538 aa9.23□□□□□ -0.93
SSPN-206ENST00000539019 SASH3O75995 380 aa9.22□□□□□ -0.93
SSPN-206ENST00000539019 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
SSPN-206ENST00000539019 C16orf46Q6P387 395 aa9.22□□□□□ -0.93
SSPN-206ENST00000539019 CD163Q86VB7 1156 aa9.22□□□□□ -0.93
SSPN-206ENST00000539019 CLP1Q92989 425 aaKnown RBP9.22□□□□□ -0.93
SSPN-206ENST00000539019 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
SSPN-206ENST00000539019 C11orf16Q9NQ32 467 aa9.22□□□□□ -0.93
SSPN-206ENST00000539019 CHRNA4P43681 627 aa9.21□□□□□ -0.94
SSPN-206ENST00000539019 CCDC82Q8N4S0 544 aa9.21□□□□□ -0.94
SSPN-206ENST00000539019 NUDT8Q8WV74 236 aa9.21□□□□□ -0.94
SSPN-206ENST00000539019 MAP3K6O95382 1288 aa9.2□□□□□ -0.94
SSPN-206ENST00000539019 NID1P14543 1247 aa9.2□□□□□ -0.94
SSPN-206ENST00000539019 BRD2P25440 801 aaKnown RBP9.2□□□□□ -0.94
SSPN-206ENST00000539019 ETFBKMTQ8IXQ9 262 aa9.2□□□□□ -0.94
SSPN-206ENST00000539019 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
SSPN-206ENST00000539019 CMTR1Q8N1G2 835 aaKnown RBP9.2□□□□□ -0.94
SSPN-206ENST00000539019 WIZO95785 1651 aa9.2□□□□□ -0.94
SSPN-206ENST00000539019 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 LILRB5O75023 590 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 FAM26DQ5JW98 314 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 NAGPAQ9UK23 515 aa9.19□□□□□ -0.94
SSPN-206ENST00000539019 FAM229AH3BQW9 127 aa9.18□□□□□ -0.94
SSPN-206ENST00000539019 TNFRSF10BO14763 440 aa9.18□□□□□ -0.94
SSPN-206ENST00000539019 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
SSPN-206ENST00000539019 RARAP10276 462 aa9.18□□□□□ -0.94
SSPN-206ENST00000539019 PSAPL1Q6NUJ1 521 aa9.18□□□□□ -0.94
SSPN-206ENST00000539019 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
SSPN-206ENST00000539019 JPH1Q9HDC5 661 aaPredicted RBP9.18□□□□□ -0.94
SSPN-206ENST00000539019 XYLBO75191 536 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 EGFRP00533 1210 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 BAG6P46379 1132 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
SSPN-206ENST00000539019 PRRT3Q5FWE3 981 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 C14orf37Q86TY3 774 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 FAM35AQ86V20 835 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 KCNMB2Q9Y691 235 aa9.17□□□□□ -0.94
SSPN-206ENST00000539019 BAZ1BQ9UIG0 1483 aaKnown RBP9.16□□□□□ -0.94
SSPN-206ENST00000539019 CPB1P15086 417 aa9.16□□□□□ -0.94
SSPN-206ENST00000539019 PCSK7Q16549 785 aa9.16□□□□□ -0.94
SSPN-206ENST00000539019 TRAPPC3LQ5T215 181 aa9.16□□□□□ -0.94
SSPN-206ENST00000539019 TRPM4Q8TD43 1214 aa9.16□□□□□ -0.94
SSPN-206ENST00000539019 RGS9O75916 674 aaPredicted RBP9.15□□□□□ -0.94
SSPN-206ENST00000539019 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
SSPN-206ENST00000539019 AFF1P51825 1210 aaKnown RBP9.15□□□□□ -0.94
SSPN-206ENST00000539019 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
SSPN-206ENST00000539019 GRIK4Q16099 956 aa9.13□□□□□ -0.95
SSPN-206ENST00000539019 PERM1Q5SV97 790 aa9.13□□□□□ -0.95
SSPN-206ENST00000539019 HFE2Q6ZVN8 426 aa9.13□□□□□ -0.95
SSPN-206ENST00000539019 LPIN3Q9BQK8 851 aa9.13□□□□□ -0.95
SSPN-206ENST00000539019 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
SSPN-206ENST00000539019 SEPT3Q9UH03 358 aa9.13□□□□□ -0.95
SSPN-206ENST00000539019 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
SSPN-206ENST00000539019 ADAM23O75077 832 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 APBA3O96018 575 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 GPLD1P80108 840 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 STIM2Q9P246 746 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 A0A0A0MRY4 1105 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 ZBTB39O15060 712 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 MMP20O60882 483 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 PPP1R15AO75807 674 aaPredicted RBP9.12□□□□□ -0.95
SSPN-206ENST00000539019 FURINP09958 794 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 ZAP70P43403 619 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 NRLP54845 237 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 PLAURQ03405 335 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 TRIP4Q15650 581 aaPredicted RBP9.12□□□□□ -0.95
SSPN-206ENST00000539019 ELMSAN1Q6PJG2 1045 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 DMRTC2Q8IXT2 367 aaPredicted RBP9.12□□□□□ -0.95
SSPN-206ENST00000539019 FRRS1LQ9P0K9 344 aa9.12□□□□□ -0.95
SSPN-206ENST00000539019 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
SSPN-206ENST00000539019 ARID4AP29374 1257 aaPredicted RBP9.11□□□□□ -0.95
SSPN-206ENST00000539019 SCNN1AP37088 669 aa9.11□□□□□ -0.95
SSPN-206ENST00000539019 GATA4P43694 442 aa9.11□□□□□ -0.95
SSPN-206ENST00000539019 GRIK5Q16478 980 aa9.11□□□□□ -0.95
SSPN-206ENST00000539019 PIK3R5Q8WYR1 880 aa9.11□□□□□ -0.95
SSPN-206ENST00000539019 J3QW42 95 aa9.1□□□□□ -0.95
SSPN-206ENST00000539019 PSAPP07602 524 aa9.1□□□□□ -0.95
SSPN-206ENST00000539019 NLRP13Q86W25 1043 aa9.1□□□□□ -0.95
SSPN-206ENST00000539019 FAM13BQ9NYF5 915 aa9.1□□□□□ -0.95
SSPN-206ENST00000539019 LOC102724428A0A0B4J2F2 783 aa9.09□□□□□ -0.95
SSPN-206ENST00000539019 UBAP1LF5GYI3 381 aa9.09□□□□□ -0.95
SSPN-206ENST00000539019 SIK1P57059 783 aa9.09□□□□□ -0.95
SSPN-206ENST00000539019 DOC2BQ14184 412 aa9.09□□□□□ -0.95
SSPN-206ENST00000539019 MSL1Q68DK7 614 aa9.09□□□□□ -0.95
SSPN-206ENST00000539019 GPR152Q8TDT2 470 aa9.09□□□□□ -0.95
SSPN-206ENST00000539019 TTC9Q92623 222 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms