RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
PDE4C-204ENST00000539010 SF3B3Q15393 1217 aaKnown RBP17.64■□□□□ 0.41
PDE4C-204ENST00000539010 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
PDE4C-204ENST00000539010 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
PDE4C-204ENST00000539010 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
PDE4C-204ENST00000539010 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
PDE4C-204ENST00000539010 POLA2Q14181 598 aa17.63■□□□□ 0.41
PDE4C-204ENST00000539010 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
PDE4C-204ENST00000539010 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
PDE4C-204ENST00000539010 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
PDE4C-204ENST00000539010 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 PDE6BP35913 854 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 TAF7LQ5H9L4 462 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 CCDC85AQ96PX6 553 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-204ENST00000539010 GREM2Q9H772 168 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
PDE4C-204ENST00000539010 ITGA6P23229 1130 aa17.6■□□□□ 0.41
PDE4C-204ENST00000539010 HSP90AB4PQ58FF6 505 aa17.6■□□□□ 0.41
PDE4C-204ENST00000539010 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
PDE4C-204ENST00000539010 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
PDE4C-204ENST00000539010 KLRG2A4D1S0 409 aaPredicted RBP17.59■□□□□ 0.41
PDE4C-204ENST00000539010 IGHDP01880 384 aa17.59■□□□□ 0.41
PDE4C-204ENST00000539010 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
PDE4C-204ENST00000539010 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
PDE4C-204ENST00000539010 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
PDE4C-204ENST00000539010 COPRSQ9NQ92 184 aa17.59■□□□□ 0.41
PDE4C-204ENST00000539010 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.41
PDE4C-204ENST00000539010 RFX5P48382 616 aaPredicted RBP17.58■□□□□ 0.41
PDE4C-204ENST00000539010 CRY2Q49AN0 593 aa17.58■□□□□ 0.41
PDE4C-204ENST00000539010 C3orf67Q6ZVT6 689 aa17.58■□□□□ 0.41
PDE4C-204ENST00000539010 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.41
PDE4C-204ENST00000539010 SPON1Q9HCB6 807 aa17.58■□□□□ 0.41
PDE4C-204ENST00000539010 TNRC6CQ9HCJ0 1690 aaKnown RBP17.58■□□□□ 0.4
PDE4C-204ENST00000539010 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.4
PDE4C-204ENST00000539010 FBXO3Q9UK99 471 aa17.58■□□□□ 0.4
PDE4C-204ENST00000539010 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.4
PDE4C-204ENST00000539010 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
PDE4C-204ENST00000539010 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
PDE4C-204ENST00000539010 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.4
PDE4C-204ENST00000539010 RBM17Q96I25 401 aaKnown RBP17.57■□□□□ 0.4
PDE4C-204ENST00000539010 C10orf71Q711Q0 1435 aa17.56■□□□□ 0.4
PDE4C-204ENST00000539010 RAB11FIP3O75154 756 aa17.56■□□□□ 0.4
PDE4C-204ENST00000539010 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
PDE4C-204ENST00000539010 SGIP1Q9BQI5 828 aa17.56■□□□□ 0.4
PDE4C-204ENST00000539010 H0YIN7 160 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 ERC1Q8IUD2 1116 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
PDE4C-204ENST00000539010 PA2G4Q9UQ80 394 aaKnown RBP17.55■□□□□ 0.4
PDE4C-204ENST00000539010 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 NPR1P16066 1061 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
PDE4C-204ENST00000539010 PTGER2P43116 358 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 KLHDC4Q8TBB5 520 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
PDE4C-204ENST00000539010 EYA2O00167 538 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 CIAO1O76071 339 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 SRGNP10124 158 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 GRAPQ13588 217 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 C2CD5Q86YS7 1000 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
PDE4C-204ENST00000539010 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
PDE4C-204ENST00000539010 CRAMP1Q96RY5 1269 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 SIL1Q9H173 461 aa17.54■□□□□ 0.4
PDE4C-204ENST00000539010 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
PDE4C-204ENST00000539010 ALDH1B1P30837 517 aa17.53■□□□□ 0.4
PDE4C-204ENST00000539010 IL15P40933 162 aaPredicted RBP17.53■□□□□ 0.4
PDE4C-204ENST00000539010 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
PDE4C-204ENST00000539010 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
PDE4C-204ENST00000539010 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
PDE4C-204ENST00000539010 BBOX1O75936 387 aa17.52■□□□□ 0.39
PDE4C-204ENST00000539010 TGFB2P61812 414 aa17.52■□□□□ 0.39
PDE4C-204ENST00000539010 STYK1Q6J9G0 422 aa17.52■□□□□ 0.39
PDE4C-204ENST00000539010 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.39
PDE4C-204ENST00000539010 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.39
PDE4C-204ENST00000539010 BSDC1Q9NW68 430 aaPredicted RBP17.52■□□□□ 0.39
PDE4C-204ENST00000539010 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.39
PDE4C-204ENST00000539010 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
PDE4C-204ENST00000539010 TMC4Q7Z404 712 aa17.51■□□□□ 0.39
PDE4C-204ENST00000539010 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDE4C-204ENST00000539010 TAF1P21675 1872 aa17.51■□□□□ 0.39
PDE4C-204ENST00000539010 APBB1O00213 710 aa17.5■□□□□ 0.39
PDE4C-204ENST00000539010 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
PDE4C-204ENST00000539010 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
PDE4C-204ENST00000539010 SPEF2Q9C093 1822 aa17.5■□□□□ 0.39
PDE4C-204ENST00000539010 NUCB1Q02818 461 aa17.49■□□□□ 0.39
PDE4C-204ENST00000539010 LRRC24Q50LG9 513 aa17.49■□□□□ 0.39
PDE4C-204ENST00000539010 ATG9AQ7Z3C6 839 aa17.49■□□□□ 0.39
PDE4C-204ENST00000539010 RHPN1Q8TCX5 695 aa17.49■□□□□ 0.39
PDE4C-204ENST00000539010 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
PDE4C-204ENST00000539010 PPP1R1BQ9UD71 204 aaPredicted RBP17.49■□□□□ 0.39
PDE4C-204ENST00000539010 RIPOR2Q9Y4F9 1068 aa17.49■□□□□ 0.39
PDE4C-204ENST00000539010 COL11A2P13942 1736 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms