RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FILIP1Q7Z7B0 1213 aa21.83■■□□□ 1.09
SFSWAP-207ENST00000538548 NOL10Q9BSC4 688 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-207ENST00000538548 L2HGDHQ9H9P8 463 aa21.83■■□□□ 1.09
SFSWAP-207ENST00000538548 TECPR2O15040 1411 aa21.83■■□□□ 1.09
SFSWAP-207ENST00000538548 GNAT3A8MTJ3 354 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 BECN2A8MW95 431 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 HIP1O00291 1037 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 RPS6KB1P23443 525 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 ST7Q9NRC1 585 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.08
SFSWAP-207ENST00000538548 TULP2O00295 520 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 GSDMDP57764 484 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 SNRKQ9NRH2 765 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 CFAP45Q9UL16 551 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 ADCY9O60503 1353 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 CYP2C19P33261 490 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 RESTQ13127 1097 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 TOB2Q14106 344 aaPredicted RBP21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 FLT4P35916 1363 aa21.82■■□□□ 1.08
SFSWAP-207ENST00000538548 COL9A3Q14050 684 aaPredicted RBP21.81■■□□□ 1.08
SFSWAP-207ENST00000538548 THEMISQ8N1K5 641 aaPredicted RBP21.81■■□□□ 1.08
SFSWAP-207ENST00000538548 DNAJC2Q99543 621 aaKnown RBP21.81■■□□□ 1.08
SFSWAP-207ENST00000538548 ACEP12821 1306 aa21.81■■□□□ 1.08
SFSWAP-207ENST00000538548 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
SFSWAP-207ENST00000538548 ZSCAN16Q9H4T2 348 aaPredicted RBP21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 SBNO1A3KN83 1393 aa21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 IFIT2P09913 472 aaKnown RBP21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 USP6P35125 1406 aa21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 TCEANC2Q96MN5 208 aa21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 EYA1Q99502 592 aa21.8■■□□□ 1.08
SFSWAP-207ENST00000538548 SOX12O15370 315 aa21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 MTX1Q13505 466 aa21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 SNW1Q13573 536 aaKnown RBP21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 DHX40Q8IX18 779 aaKnown RBP21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 FAM227BQ96M60 508 aa21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 FHOD1Q9Y613 1164 aa21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 NPHP4O75161 1426 aaPredicted RBP21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 PDE4CQ08493 712 aa21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 NMIQ13287 307 aaPredicted RBP21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 BEND3Q5T5X7 828 aa21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 OSBPL5Q9H0X9 879 aaPredicted RBP21.79■■□□□ 1.08
SFSWAP-207ENST00000538548 ERCC6LQ2NKX8 1250 aa21.78■■□□□ 1.08
SFSWAP-207ENST00000538548 ANO10Q9NW15 660 aa21.78■■□□□ 1.08
SFSWAP-207ENST00000538548 NAP1L2Q9ULW6 460 aaPredicted RBP21.78■■□□□ 1.08
SFSWAP-207ENST00000538548 STK3Q13188 491 aa21.78■■□□□ 1.08
SFSWAP-207ENST00000538548 ERC1Q8IUD2 1116 aa21.78■■□□□ 1.08
SFSWAP-207ENST00000538548 IMPACTQ9P2X3 320 aa21.78■■□□□ 1.08
SFSWAP-207ENST00000538548 BRF1Q92994 677 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 HMG20BQ9P0W2 317 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 PLEKHG3A1L390 1219 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 VGLL3A8MV65 326 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 NPHP1O15259 732 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 TUBB4AP04350 444 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 CCDC93Q567U6 631 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 GTF3C6Q969F1 213 aa21.77■■□□□ 1.08
SFSWAP-207ENST00000538548 CLCN6P51797 869 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 TSGA10IPQ3SY00 556 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 CEP57L1Q8IYX8 460 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 IL17REQ8NFR9 667 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 PLEKHG1Q9ULL1 1385 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 H3BQV1 296 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 E4F1Q66K89 784 aaPredicted RBP21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 TSPYL1Q9H0U9 437 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 JAK2O60674 1132 aa21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 CCAR1Q8IX12 1150 aaKnown RBP21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 IPO4Q8TEX9 1081 aaKnown RBP21.76■■□□□ 1.07
SFSWAP-207ENST00000538548 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 PSDA5PKW4 1024 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 PNMA6AP0CW24 399 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 CAPN2P17655 700 aa21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 KCNA6P17658 529 aa21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 KCNJ6P48051 423 aa21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 CCDC73Q6ZRK6 1079 aa21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 PPP1R13BQ96KQ4 1090 aa21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 NAT10Q9H0A0 1025 aaKnown RBP21.75■■□□□ 1.07
SFSWAP-207ENST00000538548 AACSQ86V21 672 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 RCOR1Q9UKL0 485 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 TAF6LQ9Y6J9 622 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 A0A0D9SFI3 127 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 KINO60870 393 aaKnown RBP21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 NBPF11Q86T75 865 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
SFSWAP-207ENST00000538548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.74■■□□□ 1.073e-7■■■□□ 18.5
SFSWAP-207ENST00000538548 JCADQ9P266 1359 aa21.73■■□□□ 1.07
SFSWAP-207ENST00000538548 SYT10Q6XYQ8 523 aa21.73■■□□□ 1.07
SFSWAP-207ENST00000538548 DDX11Q96FC9 970 aa21.73■■□□□ 1.07
SFSWAP-207ENST00000538548 HNRNPH2P55795 449 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-207ENST00000538548 AOPEPQ8N6M6 819 aa21.73■■□□□ 1.07
SFSWAP-207ENST00000538548 GOLPH3LQ9H4A5 285 aa21.73■■□□□ 1.07
SFSWAP-207ENST00000538548 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms