RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-205ENST00000538545 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-205ENST00000538545 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-205ENST00000538545 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
ACTN1-205ENST00000538545 EYA2O00167 538 aa17.14■□□□□ 0.33
ACTN1-205ENST00000538545 IRS4O14654 1257 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-205ENST00000538545 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
ACTN1-205ENST00000538545 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
ACTN1-205ENST00000538545 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
ACTN1-205ENST00000538545 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
ACTN1-205ENST00000538545 COL15A1P39059 1388 aa17.13■□□□□ 0.33
ACTN1-205ENST00000538545 SNAP23O00161 211 aa17.13■□□□□ 0.33
ACTN1-205ENST00000538545 ADORA1P30542 326 aa17.13■□□□□ 0.33
ACTN1-205ENST00000538545 TAF7LQ5H9L4 462 aa17.13■□□□□ 0.33
ACTN1-205ENST00000538545 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
ACTN1-205ENST00000538545 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
ACTN1-205ENST00000538545 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
ACTN1-205ENST00000538545 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
ACTN1-205ENST00000538545 A0A1B0GUL7 405 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 ITGA6P23229 1130 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 BICDL1Q6ZP65 573 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-205ENST00000538545 SNRKQ9NRH2 765 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 CCDC129Q6ZRS4 1044 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 AFF2P51816 1311 aa17.12■□□□□ 0.33
ACTN1-205ENST00000538545 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
ACTN1-205ENST00000538545 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
ACTN1-205ENST00000538545 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
ACTN1-205ENST00000538545 CAMTA2O94983 1202 aa17.11■□□□□ 0.33
ACTN1-205ENST00000538545 PKP1Q13835 747 aa17.11■□□□□ 0.33
ACTN1-205ENST00000538545 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
ACTN1-205ENST00000538545 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
ACTN1-205ENST00000538545 RAD50Q92878 1312 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-205ENST00000538545 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
ACTN1-205ENST00000538545 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
ACTN1-205ENST00000538545 GOLIM4O00461 696 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 CSF1RP07333 972 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 HSPA4P34932 840 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
ACTN1-205ENST00000538545 ATP5JP18859 108 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 DDIT3P35638 169 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 CTSWP56202 376 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 ADCK5Q3MIX3 580 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 LDHAL6AQ6ZMR3 332 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 GJD4Q96KN9 370 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-205ENST00000538545 CEP126Q9P2H0 1117 aa17.09■□□□□ 0.33
ACTN1-205ENST00000538545 ST18O60284 1047 aa17.08■□□□□ 0.33
ACTN1-205ENST00000538545 MCCP23508 829 aa17.08■□□□□ 0.33
ACTN1-205ENST00000538545 SCARF1Q14162 830 aa17.08■□□□□ 0.33
ACTN1-205ENST00000538545 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
ACTN1-205ENST00000538545 SRP68Q9UHB9 627 aaKnown RBP17.08■□□□□ 0.32
ACTN1-205ENST00000538545 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
ACTN1-205ENST00000538545 CHAMP1Q96JM3 812 aa17.07■□□□□ 0.32
ACTN1-205ENST00000538545 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
ACTN1-205ENST00000538545 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-205ENST00000538545 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-205ENST00000538545 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
ACTN1-205ENST00000538545 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
ACTN1-205ENST00000538545 DEKP35659 375 aaKnown RBP17.06■□□□□ 0.32
ACTN1-205ENST00000538545 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 CNNM1Q9NRU3 951 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 SSFA2P28290 1259 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 METTL24Q5JXM2 366 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 XAGE2Q96GT9 111 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 TMX3Q96JJ7 454 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 KCNJ4P48050 445 aa17.06■□□□□ 0.32
ACTN1-205ENST00000538545 ZNF609O15014 1411 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 TAF5LO75529 589 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
ACTN1-205ENST00000538545 HAUS7Q99871 368 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
ACTN1-205ENST00000538545 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 TAF1P21675 1872 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 PDE8AO60658 829 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
ACTN1-205ENST00000538545 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-205ENST00000538545 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 MYH3P11055 1940 aa17.05■□□□□ 0.32
ACTN1-205ENST00000538545 WTIPA6NIX2 430 aaPredicted RBP17.04■□□□□ 0.32
ACTN1-205ENST00000538545 PHF14O94880 888 aa17.04■□□□□ 0.32
ACTN1-205ENST00000538545 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
ACTN1-205ENST00000538545 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
ACTN1-205ENST00000538545 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
ACTN1-205ENST00000538545 PAG1Q9NWQ8 432 aa17.04■□□□□ 0.32
ACTN1-205ENST00000538545 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
ACTN1-205ENST00000538545 A0A0G2JLW4 131 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 GNPATO15228 680 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms