RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 C7orf43Q8WVR3 580 aa16.71■□□□□ 0.27
COPS7A-207ENST00000538375 FRAT1Q92837 279 aaPredicted RBP16.71■□□□□ 0.27
COPS7A-207ENST00000538375 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
COPS7A-207ENST00000538375 ARFGEF1Q9Y6D6 1849 aa16.7■□□□□ 0.26
COPS7A-207ENST00000538375 NFKBIEO00221 500 aa16.7■□□□□ 0.26
COPS7A-207ENST00000538375 BCAR3O75815 825 aa16.7■□□□□ 0.26
COPS7A-207ENST00000538375 ALDH1L1O75891 902 aa16.7■□□□□ 0.26
COPS7A-207ENST00000538375 GRAPQ13588 217 aa16.7■□□□□ 0.26
COPS7A-207ENST00000538375 GRAPLQ8TC17 118 aaPredicted RBP16.7■□□□□ 0.26
COPS7A-207ENST00000538375 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
COPS7A-207ENST00000538375 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
COPS7A-207ENST00000538375 LMNB1P20700 586 aa16.69■□□□□ 0.26
COPS7A-207ENST00000538375 CC2D2BQ6DHV5 1058 aa16.69■□□□□ 0.26
COPS7A-207ENST00000538375 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
COPS7A-207ENST00000538375 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
COPS7A-207ENST00000538375 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
COPS7A-207ENST00000538375 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
COPS7A-207ENST00000538375 GRM8O00222 908 aa16.68■□□□□ 0.26
COPS7A-207ENST00000538375 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
COPS7A-207ENST00000538375 CTSWP56202 376 aa16.68■□□□□ 0.26
COPS7A-207ENST00000538375 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
COPS7A-207ENST00000538375 IFFO2Q5TF58 517 aa16.68■□□□□ 0.26
COPS7A-207ENST00000538375 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
COPS7A-207ENST00000538375 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
COPS7A-207ENST00000538375 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
COPS7A-207ENST00000538375 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
COPS7A-207ENST00000538375 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
COPS7A-207ENST00000538375 PRELPP51888 382 aa16.66■□□□□ 0.26
COPS7A-207ENST00000538375 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
COPS7A-207ENST00000538375 CASP7P55210 303 aa16.66■□□□□ 0.26
COPS7A-207ENST00000538375 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
COPS7A-207ENST00000538375 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
COPS7A-207ENST00000538375 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
COPS7A-207ENST00000538375 GREM2Q9H772 168 aa16.66■□□□□ 0.26
COPS7A-207ENST00000538375 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
COPS7A-207ENST00000538375 LAMB2P55268 1798 aa16.65■□□□□ 0.26
COPS7A-207ENST00000538375 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
COPS7A-207ENST00000538375 DPP8Q6V1X1 898 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-207ENST00000538375 TMC4Q7Z404 712 aa16.65■□□□□ 0.26
COPS7A-207ENST00000538375 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
COPS7A-207ENST00000538375 MPNDQ8N594 471 aa16.65■□□□□ 0.26
COPS7A-207ENST00000538375 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
COPS7A-207ENST00000538375 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-207ENST00000538375 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
COPS7A-207ENST00000538375 CDC5LQ99459 802 aaKnown RBP16.64■□□□□ 0.25
COPS7A-207ENST00000538375 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
COPS7A-207ENST00000538375 LTBP3Q9NS15 1303 aa16.64■□□□□ 0.25
COPS7A-207ENST00000538375 FOXO4P98177 505 aa16.63■□□□□ 0.25
COPS7A-207ENST00000538375 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
COPS7A-207ENST00000538375 CLUAP1Q96AJ1 413 aa16.63■□□□□ 0.25
COPS7A-207ENST00000538375 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 CSF1RP07333 972 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 ITGA6P23229 1130 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
COPS7A-207ENST00000538375 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 PSMD1Q99460 953 aa16.62■□□□□ 0.25
COPS7A-207ENST00000538375 TAF1P21675 1872 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 C6orf229H3BNL8 230 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 TOMM70O94826 608 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
COPS7A-207ENST00000538375 GPSM2P81274 684 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
COPS7A-207ENST00000538375 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 DNAJC5GQ8N7S2 189 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 JDP2Q8WYK2 163 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 ANKIB1Q9P2G1 1089 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
COPS7A-207ENST00000538375 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
COPS7A-207ENST00000538375 TRIM27P14373 513 aa16.6■□□□□ 0.25
COPS7A-207ENST00000538375 CCDC57Q2TAC2 916 aa16.6■□□□□ 0.25
COPS7A-207ENST00000538375 DPY19L2Q6NUT2 758 aa16.6■□□□□ 0.25
COPS7A-207ENST00000538375 LARGE2Q8N3Y3 721 aa16.6■□□□□ 0.25
COPS7A-207ENST00000538375 NMRK2Q9NPI5 230 aa16.6■□□□□ 0.25
COPS7A-207ENST00000538375 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
COPS7A-207ENST00000538375 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
COPS7A-207ENST00000538375 UBTFL1P0CB47 393 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-207ENST00000538375 UTYO14607 1347 aa16.59■□□□□ 0.25
COPS7A-207ENST00000538375 APLP1P51693 650 aa16.58■□□□□ 0.24
COPS7A-207ENST00000538375 AOC3Q16853 763 aa16.58■□□□□ 0.24
COPS7A-207ENST00000538375 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
COPS7A-207ENST00000538375 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
COPS7A-207ENST00000538375 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
COPS7A-207ENST00000538375 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-207ENST00000538375 RCAN3Q9UKA8 241 aa16.58■□□□□ 0.24
COPS7A-207ENST00000538375 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
COPS7A-207ENST00000538375 SBF1O95248 1867 aa16.58■□□□□ 0.24
COPS7A-207ENST00000538375 CCDC88AQ3V6T2 1871 aa16.57■□□□□ 0.24
COPS7A-207ENST00000538375 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
COPS7A-207ENST00000538375 WASHC4Q2M389 1173 aa16.57■□□□□ 0.24
COPS7A-207ENST00000538375 NIM1KQ8IY84 436 aa16.57■□□□□ 0.24
COPS7A-207ENST00000538375 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
COPS7A-207ENST00000538375 ZNF594Q96JF6 807 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-207ENST00000538375 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms