RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ZNF790Q6PG37 636 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 LGR6Q9HBX8 967 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 BIN2Q9UBW5 565 aaPredicted RBP6.22□□□□□ -1.41
LRP6-203ENST00000538239 SAMD9Q5K651 1589 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 ADGBQ8N7X0 1667 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 PRKG1Q13976 671 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 CCDC87Q9NVE4 849 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 PAG1Q9NWQ8 432 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 MAPKBP1O60336 1514 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 SBNO1A3KN83 1393 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.21□□□□□ -1.41
LRP6-203ENST00000538239 CBFA2T2O43439 604 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 A1BGP04217 495 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 GPR162Q16538 588 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 DNAI2Q9GZS0 605 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 LUC7LQ9NQ29 371 aaKnown RBP6.21□□□□□ -1.41
LRP6-203ENST00000538239 MCM9Q9NXL9 1143 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 EDC4Q6P2E9 1401 aaKnown RBP6.21□□□□□ -1.41
LRP6-203ENST00000538239 TTC22Q5TAA0 569 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 KRT23Q9C075 422 aa6.21□□□□□ -1.41
LRP6-203ENST00000538239 PPM1FP49593 454 aaPredicted RBP6.21□□□□□ -1.42
LRP6-203ENST00000538239 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
LRP6-203ENST00000538239 CCDC150Q8NCX0 1101 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 RSPH6AQ9H0K4 717 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 SH2B1Q9NRF2 756 aaPredicted RBP6.21□□□□□ -1.42
LRP6-203ENST00000538239 TNNI2P48788 182 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 EIF6P56537 245 aaKnown RBP6.21□□□□□ -1.42
LRP6-203ENST00000538239 CCDC181Q5TID7 509 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 TBC1D9Q6ZT07 1266 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 CALML4Q96GE6 196 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 SLC52A2Q9HAB3 445 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 SBNO2Q9Y2G9 1366 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 ITGA6P23229 1130 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 GJB2P29033 226 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 LIMCH1Q9UPQ0 1083 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 POTEJP0CG39 1038 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 MCM5P33992 734 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 ATP8B2P98198 1209 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 ENOX2Q16206 610 aaKnown RBP6.21□□□□□ -1.42
LRP6-203ENST00000538239 LARGE2Q8N3Y3 721 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 BICD1Q96G01 975 aa6.21□□□□□ -1.42
LRP6-203ENST00000538239 TARBP1Q13395 1621 aaKnown RBP6.21□□□□□ -1.42
LRP6-203ENST00000538239 CDR1P51861 262 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 ESR2Q92731 530 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 GGA1Q9UJY5 639 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 ZCCHC11Q5TAX3 1644 aaKnown RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 KLF18A0A0U1RQI7 1052 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 IGHDP01880 384 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 TNNT3P45378 269 aaPredicted RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 MCMDC2Q4G0Z9 681 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 DPP8Q6V1X1 898 aaPredicted RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 PANK2Q9BZ23 570 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 PLEKHH1Q9ULM0 1364 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 ZFYP08048 801 aaPredicted RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 RAB3GAP1Q15042 981 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 SYCP3Q8IZU3 236 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 LINS1Q8NG48 757 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 ORC3Q9UBD5 711 aaPredicted RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 BCS1LQ9Y276 419 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 CCP110O43303 1012 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 MRE11P49959 708 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 SMARCC2Q8TAQ2 1214 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 ARGLU1Q9NWB6 273 aaPredicted RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 NPHP4O75161 1426 aaPredicted RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 PZPP20742 1482 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 SMTNL1A8MU46 457 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 HMGN5P82970 282 aaKnown RBP6.2□□□□□ -1.42
LRP6-203ENST00000538239 MMRN2Q9H8L6 949 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 TMEM94Q12767 1356 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 CALM1P0DP23 149 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 CALM2P0DP24 149 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 CALM3P0DP25 149 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 RXRBP28702 533 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 PLBD2Q8NHP8 589 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 TCP11L1Q9NUJ3 509 aa6.2□□□□□ -1.42
LRP6-203ENST00000538239 NMIQ13287 307 aaPredicted RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 KIAA1328Q86T90 577 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 DNAJC10Q8IXB1 793 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 ZNF594Q96JF6 807 aaPredicted RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 UGGT1Q9NYU2 1555 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 FAM182BQ5T319 152 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 CNNM3Q8NE01 707 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 ZNF397Q8NF99 534 aaPredicted RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TAF5LO75529 589 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TRIM37O94972 964 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 IDEP14735 1019 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 PLCG2P16885 1265 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 NAPAP54920 295 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 MAP3K11Q16584 847 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 RTN1Q16799 776 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 CCDC178Q5BJE1 867 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 CHST3Q7LGC8 479 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TCEANC2Q96MN5 208 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 CNNM2Q9H8M5 875 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 PICK1Q9NRD5 415 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 ZBTB43O43298 467 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 CFAP100Q494V2 611 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 PARP10Q53GL7 1025 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms