RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 FIBPO43427 364 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 PLA2G4AP47712 749 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 LUZP1Q86V48 1076 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 NEMFO60524 1076 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 ADAMTS2O95450 1211 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 F13A1P00488 732 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 CASQ1P31415 396 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 TPM4P67936 248 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 OSBPL3Q9H4L5 887 aa13.39□□□□□ -0.27
SEMA4D-221ENST00000537934 STX6O43752 255 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 TEFQ10587 303 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 ICE2Q659A1 982 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 KRBA2Q6ZNG9 492 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 MYO1CO00159 1063 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 CYP27B1O15528 508 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 KCNQ3O43525 872 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 TYRO3Q06418 890 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
SEMA4D-221ENST00000537934 PHKG2P15735 406 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 CDC25BP30305 580 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 MAP3K11Q16584 847 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 RAD50Q92878 1312 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 LRRC8AQ8IWT6 810 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
SEMA4D-221ENST00000537934 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 KIF2AO00139 706 aaPredicted RBP13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 SYT1P21579 422 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 CLCN6P51797 869 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 TDRD7Q8NHU6 1098 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 CWC15Q9P013 229 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 HDAC5Q9UQL6 1122 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 CLGNO14967 610 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 KCND1Q9NSA2 647 aa13.36□□□□□ -0.27
SEMA4D-221ENST00000537934 LOC102724159A0A0B4J2E5 919 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 GPS2Q13227 327 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 PWP2Q15269 919 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 CCDC144BQ3MJ40 725 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 LRRFIP2Q9Y608 721 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 IFNL2Q8IZJ0 200 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 L2HGDHQ9H9P8 463 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-221ENST00000537934 TRIM66O15016 1216 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 PDE1AP54750 535 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 ZSCAN26Q16670 478 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 MYCBPQ99417 103 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 ELP1O95163 1332 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 ERCC6LQ2NKX8 1250 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 ANO6Q4KMQ2 910 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 CCDC191Q8NCU4 936 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 NCAPGQ9BPX3 1015 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 KDM3BQ7LBC6 1761 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
SEMA4D-221ENST00000537934 IL2RBP14784 551 aa13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 GUCY2CP25092 1073 aa13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 UBXN6Q9BZV1 441 aa13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.27
SEMA4D-221ENST00000537934 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 NPHP1O15259 732 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 ATP8B1O43520 1251 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 GOLGA6L1Q8N7Z2 621 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 TMX1Q9H3N1 280 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 APBB1O00213 710 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms