RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 MRE11P49959 708 aa11.21□□□□□ -0.61
PTPRR-205ENST00000537619 HAUS7Q99871 368 aa11.21□□□□□ -0.61
PTPRR-205ENST00000537619 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.61
PTPRR-205ENST00000537619 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.61
PTPRR-205ENST00000537619 PLCH1Q4KWH8 1693 aa11.21□□□□□ -0.61
PTPRR-205ENST00000537619 TAF5LO75529 589 aa11.21□□□□□ -0.62
PTPRR-205ENST00000537619 CCDC129Q6ZRS4 1044 aa11.21□□□□□ -0.62
PTPRR-205ENST00000537619 SEC62Q99442 399 aaKnown RBP11.21□□□□□ -0.62
PTPRR-205ENST00000537619 PDRG1Q9NUG6 133 aa11.21□□□□□ -0.62
PTPRR-205ENST00000537619 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.62
PTPRR-205ENST00000537619 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
PTPRR-205ENST00000537619 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
PTPRR-205ENST00000537619 BCL9O00512 1426 aa11.2□□□□□ -0.62
PTPRR-205ENST00000537619 TCIRG1Q13488 830 aa11.2□□□□□ -0.62
PTPRR-205ENST00000537619 SLFNL1Q499Z3 407 aa11.2□□□□□ -0.62
PTPRR-205ENST00000537619 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
PTPRR-205ENST00000537619 CAVIN1Q6NZI2 390 aaKnown RBP11.2□□□□□ -0.62
PTPRR-205ENST00000537619 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
PTPRR-205ENST00000537619 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
PTPRR-205ENST00000537619 LRP6O75581 1613 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 TIMM10P62072 90 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
PTPRR-205ENST00000537619 SYNE4Q8N205 404 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
PTPRR-205ENST00000537619 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
PTPRR-205ENST00000537619 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 EYA2O00167 538 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 HLFQ16534 295 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 ME3Q16798 604 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 ZSCAN23Q3MJ62 389 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
PTPRR-205ENST00000537619 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
PTPRR-205ENST00000537619 CCDC83Q8IWF9 413 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 TCEANC2Q96MN5 208 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
PTPRR-205ENST00000537619 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
PTPRR-205ENST00000537619 IL15P40933 162 aaPredicted RBP11.18□□□□□ -0.62
PTPRR-205ENST00000537619 KCNJ4P48050 445 aa11.18□□□□□ -0.62
PTPRR-205ENST00000537619 ZNF445P59923 1031 aa11.18□□□□□ -0.62
PTPRR-205ENST00000537619 TRIM28Q13263 835 aaKnown RBP11.18□□□□□ -0.62
PTPRR-205ENST00000537619 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
PTPRR-205ENST00000537619 TMEM63CQ9P1W3 806 aa11.18□□□□□ -0.62
PTPRR-205ENST00000537619 TPCN1Q9ULQ1 816 aa11.18□□□□□ -0.62
PTPRR-205ENST00000537619 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
PTPRR-205ENST00000537619 CIAO1O76071 339 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 KBTBD3Q8NAB2 608 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 GDPD2Q9HCC8 539 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 MAP3K15Q6ZN16 1313 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 WDR33Q9C0J8 1336 aaKnown RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 GADD45BO75293 160 aaPredicted RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 PCCAP05165 728 aaPredicted RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 SYT1P21579 422 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 TOB2Q14106 344 aaPredicted RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 NEUROD6Q96NK8 337 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
PTPRR-205ENST00000537619 PLA2G12BQ9BX93 195 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 ZBTB1Q9Y2K1 713 aa11.17□□□□□ -0.62
PTPRR-205ENST00000537619 RIC1Q4ADV7 1423 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 SLIT2O94813 1529 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 DOT1LQ8TEK3 1739 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 A0A1B0GUL7 405 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 GOLIM4O00461 696 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 ZSCAN22P10073 491 aaPredicted RBP11.16□□□□□ -0.62
PTPRR-205ENST00000537619 RPS6KB1P23443 525 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 GJB2P29033 226 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 ADORA1P30542 326 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
PTPRR-205ENST00000537619 TEX13AQ9BXU3 409 aaPredicted RBP11.16□□□□□ -0.62
PTPRR-205ENST00000537619 RRAGDQ9NQL2 400 aaPredicted RBP11.16□□□□□ -0.62
PTPRR-205ENST00000537619 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 SH3TC1Q8TE82 1336 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 NRAPQ86VF7 1730 aa11.16□□□□□ -0.62
PTPRR-205ENST00000537619 STX6O43752 255 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 CSF1RP07333 972 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 GPTP24298 496 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 KIF6Q6ZMV9 814 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
PTPRR-205ENST00000537619 ZSCAN31Q96LW9 406 aaPredicted RBP11.15□□□□□ -0.62
PTPRR-205ENST00000537619 SH2B1Q9NRF2 756 aaPredicted RBP11.15□□□□□ -0.62
PTPRR-205ENST00000537619 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.15□□□□□ -0.62
PTPRR-205ENST00000537619 A0A0G2JLW4 131 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 STARD3NLO95772 234 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 MCMDC2Q4G0Z9 681 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 BLOC1S2Q6QNY1 142 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 STOX1Q6ZVD7 989 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 NLRP10Q86W26 655 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 HMG20BQ9P0W2 317 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 MTMR6Q9Y217 621 aa11.15□□□□□ -0.62
PTPRR-205ENST00000537619 F13A1P00488 732 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 CYP21A2P08686 494 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 PSMA5P28066 241 aa11.14□□□□□ -0.63
PTPRR-205ENST00000537619 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms