RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 GREM2Q9H772 168 aa19.5■□□□□ 0.71
SFSWAP-206ENST00000537582 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
SFSWAP-206ENST00000537582 APBB1O00213 710 aa19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 HMMRO75330 724 aa19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 NPHP1O15259 732 aa19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 SLC10A5Q5PT55 438 aa19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 SMC5Q8IY18 1101 aa19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 ZNF594Q96JF6 807 aaPredicted RBP19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
SFSWAP-206ENST00000537582 COL4A1P02462 1669 aa19.48■□□□□ 0.71
SFSWAP-206ENST00000537582 CASZ1Q86V15 1759 aa19.48■□□□□ 0.71
SFSWAP-206ENST00000537582 ZBTB7AO95365 584 aa19.48■□□□□ 0.71
SFSWAP-206ENST00000537582 SIL1Q9H173 461 aa19.47■□□□□ 0.71
SFSWAP-206ENST00000537582 SURF6O75683 361 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-206ENST00000537582 PTPN12Q05209 780 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-206ENST00000537582 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
SFSWAP-206ENST00000537582 SEC31BQ9NQW1 1179 aa19.46■□□□□ 0.71
SFSWAP-206ENST00000537582 PARP3Q9Y6F1 533 aa19.46■□□□□ 0.71
SFSWAP-206ENST00000537582 NRXN2Q9P2S2 1712 aa19.46■□□□□ 0.71
SFSWAP-206ENST00000537582 ITGA6P23229 1130 aa19.45■□□□□ 0.7
SFSWAP-206ENST00000537582 PDZRN3Q9UPQ7 1066 aa19.45■□□□□ 0.7
SFSWAP-206ENST00000537582 MYH3P11055 1940 aa19.45■□□□□ 0.7
SFSWAP-206ENST00000537582 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-206ENST00000537582 GCC1Q96CN9 775 aa19.44■□□□□ 0.7
SFSWAP-206ENST00000537582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-206ENST00000537582 CCDC57Q2TAC2 916 aa19.44■□□□□ 0.7
SFSWAP-206ENST00000537582 PUS3Q9BZE2 481 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-206ENST00000537582 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-206ENST00000537582 ST5P78524 1137 aa19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 IFIT5Q13325 482 aaKnown RBP19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 SF3B3Q15393 1217 aaKnown RBP19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 NLRP3Q96P20 1036 aa19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 COPRSQ9NQ92 184 aa19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
SFSWAP-206ENST00000537582 NUCB1Q02818 461 aa19.42■□□□□ 0.7
SFSWAP-206ENST00000537582 CCDC152Q4G0S7 254 aa19.42■□□□□ 0.7
SFSWAP-206ENST00000537582 LRRC24Q50LG9 513 aa19.42■□□□□ 0.7
SFSWAP-206ENST00000537582 SLC16A10Q8TF71 515 aa19.42■□□□□ 0.7
SFSWAP-206ENST00000537582 LNPKQ9C0E8 428 aa19.42■□□□□ 0.7
SFSWAP-206ENST00000537582 ANKRD31Q8N7Z5 1873 aa19.42■□□□□ 0.7
SFSWAP-206ENST00000537582 ANKRD18BA2A2Z9 1011 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 HSP90B1P14625 803 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 OS9Q13438 667 aaPredicted RBP19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 RIC1Q4ADV7 1423 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 RTL9Q8NET4 1388 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 SASH1O94885 1247 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 PDE4AP27815 886 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 ATG9AQ7Z3C6 839 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 CHD1LQ86WJ1 897 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 IL1RAPL2Q9NP60 686 aa19.4■□□□□ 0.7
SFSWAP-206ENST00000537582 TAF1P21675 1872 aa19.39■□□□□ 0.7
SFSWAP-206ENST00000537582 LRP5O75197 1615 aa19.39■□□□□ 0.69
SFSWAP-206ENST00000537582 C16orf71Q8IYS4 520 aaPredicted RBP19.39■□□□□ 0.69
SFSWAP-206ENST00000537582 G3BP1Q13283 466 aaKnown RBP eCLIP19.38■□□□□ 0.69
SFSWAP-206ENST00000537582 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
SFSWAP-206ENST00000537582 RHPN1Q8TCX5 695 aa19.38■□□□□ 0.69
SFSWAP-206ENST00000537582 OTUD7AQ8TE49 926 aaPredicted RBP19.38■□□□□ 0.69
SFSWAP-206ENST00000537582 CELF1Q92879 486 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-206ENST00000537582 MTFR1LQ9H019 292 aa19.38■□□□□ 0.69
SFSWAP-206ENST00000537582 EYA2O00167 538 aa19.37■□□□□ 0.69
SFSWAP-206ENST00000537582 BRIP1Q9BX63 1249 aa19.37■□□□□ 0.69
SFSWAP-206ENST00000537582 LRRCC1Q9C099 1032 aa19.37■□□□□ 0.69
SFSWAP-206ENST00000537582 SPEF2Q9C093 1822 aa19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 RAB11FIP3O75154 756 aa19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 RGS3P49796 1198 aa19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 TFCP2Q12800 502 aa19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 LDHAL6AQ6ZMR3 332 aa19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 COL11A2P13942 1736 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 KLRG2A4D1S0 409 aaPredicted RBP19.36■□□□□ 0.69
SFSWAP-206ENST00000537582 HSP90AB4PQ58FF6 505 aa19.35■□□□□ 0.69
SFSWAP-206ENST00000537582 KIF1BPQ96EK5 621 aa19.35■□□□□ 0.69
SFSWAP-206ENST00000537582 CNNM1Q9NRU3 951 aa19.35■□□□□ 0.69
SFSWAP-206ENST00000537582 RIPOR2Q9Y4F9 1068 aa19.35■□□□□ 0.69
SFSWAP-206ENST00000537582 C10orf71Q711Q0 1435 aa19.35■□□□□ 0.69
SFSWAP-206ENST00000537582 CIAO1O76071 339 aa19.34■□□□□ 0.69
SFSWAP-206ENST00000537582 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-206ENST00000537582 RPGRQ92834 1020 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-206ENST00000537582 SGIP1Q9BQI5 828 aa19.34■□□□□ 0.69
SFSWAP-206ENST00000537582 CHRNA5P30532 468 aa19.33■□□□□ 0.69
SFSWAP-206ENST00000537582 IL15P40933 162 aaPredicted RBP19.33■□□□□ 0.69
SFSWAP-206ENST00000537582 PTGER2P43116 358 aa19.33■□□□□ 0.69
SFSWAP-206ENST00000537582 ERC1Q8IUD2 1116 aa19.33■□□□□ 0.69
SFSWAP-206ENST00000537582 ANKRD18AQ8IVF6 992 aa19.33■□□□□ 0.69
SFSWAP-206ENST00000537582 CDC5LQ99459 802 aaKnown RBP19.33■□□□□ 0.69
SFSWAP-206ENST00000537582 SRGNP10124 158 aa19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 IGHMBP2P38935 993 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 MPHOSPH8Q99549 860 aa19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 PDE6BP35913 854 aa19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 GRAPQ13588 217 aa19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 C2CD5Q86YS7 1000 aa19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 GRAPLQ8TC17 118 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 EAF2Q96CJ1 260 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-206ENST00000537582 POLD1P28340 1107 aa19.31■□□□□ 0.68
SFSWAP-206ENST00000537582 HOXA10P31260 410 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms