RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
MKS1-204ENST00000537529 EDC3Q96F86 508 aaKnown RBP18.8■□□□□ 0.6
MKS1-204ENST00000537529 ADCK5Q3MIX3 580 aa18.79■□□□□ 0.6
MKS1-204ENST00000537529 ZSCAN31Q96LW9 406 aaPredicted RBP18.79■□□□□ 0.6
MKS1-204ENST00000537529 ARXQ96QS3 562 aa18.79■□□□□ 0.6
MKS1-204ENST00000537529 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.79■□□□□ 0.6
MKS1-204ENST00000537529 RPAP1Q9BWH6 1393 aaPredicted RBP18.79■□□□□ 0.6
MKS1-204ENST00000537529 WDR33Q9C0J8 1336 aaKnown RBP18.78■□□□□ 0.6
MKS1-204ENST00000537529 NEUROD6Q96NK8 337 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 CDCA7Q9BWT1 371 aaPredicted RBP18.78■□□□□ 0.6
MKS1-204ENST00000537529 PLA2G12BQ9BX93 195 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 HMG20BQ9P0W2 317 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 FBXO3Q9UK99 471 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 XRCC6P12956 609 aaKnown RBP eCLIP18.78■□□□□ 0.6
MKS1-204ENST00000537529 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 HSP90AB3PQ58FF7 597 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 TICAM2Q86XR7 235 aa18.78■□□□□ 0.6
MKS1-204ENST00000537529 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
MKS1-204ENST00000537529 CPA1P15085 419 aa18.77■□□□□ 0.6
MKS1-204ENST00000537529 FOXD4L5Q5VV16 416 aaPredicted RBP18.77■□□□□ 0.6
MKS1-204ENST00000537529 GIGYF2Q6Y7W6 1299 aaKnown RBP18.77■□□□□ 0.6
MKS1-204ENST00000537529 ZNF589Q86UQ0 364 aaPredicted RBP18.77■□□□□ 0.6
MKS1-204ENST00000537529 ZBTB38Q8NAP3 1195 aaPredicted RBP18.77■□□□□ 0.6
MKS1-204ENST00000537529 FOXD4L4Q8WXT5 416 aaPredicted RBP18.77■□□□□ 0.6
MKS1-204ENST00000537529 PALLDQ8WX93 1383 aa18.77■□□□□ 0.6
MKS1-204ENST00000537529 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.59
MKS1-204ENST00000537529 LRRC24Q50LG9 513 aa18.77■□□□□ 0.59
MKS1-204ENST00000537529 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.59
MKS1-204ENST00000537529 ZNF594Q96JF6 807 aaPredicted RBP18.77■□□□□ 0.59
MKS1-204ENST00000537529 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
MKS1-204ENST00000537529 TAF5LO75529 589 aa18.76■□□□□ 0.59
MKS1-204ENST00000537529 GRPEL1Q9HAV7 217 aa18.76■□□□□ 0.59
MKS1-204ENST00000537529 CDHR2Q9BYE9 1310 aa18.76■□□□□ 0.59
MKS1-204ENST00000537529 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
MKS1-204ENST00000537529 CEP126Q9P2H0 1117 aa18.75■□□□□ 0.59
MKS1-204ENST00000537529 SMC3Q9UQE7 1217 aa18.75■□□□□ 0.59
MKS1-204ENST00000537529 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.75■□□□□ 0.59
MKS1-204ENST00000537529 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
MKS1-204ENST00000537529 PAG1Q9NWQ8 432 aa18.75■□□□□ 0.59
MKS1-204ENST00000537529 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
MKS1-204ENST00000537529 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 KRT32Q14532 448 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 TSGA10IPQ3SY00 556 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 MCMDC2Q4G0Z9 681 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
MKS1-204ENST00000537529 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
MKS1-204ENST00000537529 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
MKS1-204ENST00000537529 A0A1B0GUL7 405 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
MKS1-204ENST00000537529 TIMM10P62072 90 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 ANKRD1Q15327 319 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 TAF7LQ5H9L4 462 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.73■□□□□ 0.59
MKS1-204ENST00000537529 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 AKAP2Q9Y2D5 859 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 THRAP3Q9Y2W1 955 aaKnown RBP18.73■□□□□ 0.59
MKS1-204ENST00000537529 LTBP4Q8N2S1 1624 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 DOT1LQ8TEK3 1739 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 CSF1RP07333 972 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 NLRP10Q86W26 655 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 LARP6Q9BRS8 491 aaKnown RBP18.73■□□□□ 0.59
MKS1-204ENST00000537529 PUS3Q9BZE2 481 aaKnown RBP18.73■□□□□ 0.59
MKS1-204ENST00000537529 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
MKS1-204ENST00000537529 NRAPQ86VF7 1730 aa18.73■□□□□ 0.59
MKS1-204ENST00000537529 GOLIM4O00461 696 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 LARGE1O95461 756 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 IFIT5Q13325 482 aaKnown RBP18.72■□□□□ 0.59
MKS1-204ENST00000537529 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 SPEF2Q9C093 1822 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 SPATA31A1Q5TZJ5 1347 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 MBD3O95983 291 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
MKS1-204ENST00000537529 RPS6KB1P23443 525 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
MKS1-204ENST00000537529 HLFQ16534 295 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 CAVIN1Q6NZI2 390 aaKnown RBP18.72■□□□□ 0.59
MKS1-204ENST00000537529 CCDC83Q8IWF9 413 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 HELLSQ9NRZ9 838 aa18.72■□□□□ 0.59
MKS1-204ENST00000537529 ANKRD36CQ5JPF3 1778 aa18.71■□□□□ 0.59
MKS1-204ENST00000537529 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 GPTP24298 496 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
MKS1-204ENST00000537529 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 STX6O43752 255 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 ZSCAN22P10073 491 aaPredicted RBP18.7■□□□□ 0.58
MKS1-204ENST00000537529 ZNF445P59923 1031 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 DDB1Q16531 1140 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 GPT2Q8TD30 523 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
MKS1-204ENST00000537529 CCDC158Q5M9N0 1113 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 GORABQ5T7V8 394 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 SYT1P21579 422 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 CTSWP56202 376 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 ME3Q16798 604 aa18.69■□□□□ 0.58
MKS1-204ENST00000537529 LRRFIP1Q32MZ4 808 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms