RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 KIF5AQ12840 1032 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 PHLDB2Q86SQ0 1253 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 TSG101Q99816 390 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 ZNF215Q9UL58 517 aaPredicted RBP13.46□□□□□ -0.25
POLR1B-216ENST00000537335 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 CIB2O75838 187 aa13.46□□□□□ -0.26
POLR1B-216ENST00000537335 GLRX3O76003 335 aaKnown RBP13.46□□□□□ -0.26
POLR1B-216ENST00000537335 VPS37DQ86XT2 251 aa13.46□□□□□ -0.26
POLR1B-216ENST00000537335 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.26
POLR1B-216ENST00000537335 TRIM6Q9C030 488 aaPredicted RBP13.46□□□□□ -0.26
POLR1B-216ENST00000537335 MYO1CO00159 1063 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 MYO1BO43795 1136 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 VCX3AQ9NNX9 186 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 ELP1O95163 1332 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 MIER3Q7Z3K6 550 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
POLR1B-216ENST00000537335 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
POLR1B-216ENST00000537335 RASAL2Q9UJF2 1139 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 G3V3G9 751 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 PPFIA4O75335 1185 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 ERCC6LQ2NKX8 1250 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 BCAS4Q8TDM0 211 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
POLR1B-216ENST00000537335 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
POLR1B-216ENST00000537335 PRKAR2BP31323 418 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
POLR1B-216ENST00000537335 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
POLR1B-216ENST00000537335 ATP8B1O43520 1251 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
POLR1B-216ENST00000537335 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 TERF2Q15554 542 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 MRPS27Q92552 414 aaKnown RBP13.44□□□□□ -0.26
POLR1B-216ENST00000537335 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
POLR1B-216ENST00000537335 MRFAP1Q9Y605 127 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 MAGEA9P43362 315 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 SMARCC2Q8TAQ2 1214 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 BAG1Q99933 345 aaPredicted RBP13.44□□□□□ -0.26
POLR1B-216ENST00000537335 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 IKBKGQ9Y6K9 419 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 SPTY2D1Q68D10 685 aaPredicted RBP13.44□□□□□ -0.26
POLR1B-216ENST00000537335 TRIM68Q6AZZ1 485 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 AACSQ86V21 672 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 IRAK4Q9NWZ3 460 aa13.44□□□□□ -0.26
POLR1B-216ENST00000537335 SYKP43405 635 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 DDX23Q9BUQ8 820 aaKnown RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 IQCGQ9H095 443 aaKnown RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 MACROD2A1Z1Q3 448 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 CCDC170Q8IYT3 715 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 NAPGQ99747 312 aaPredicted RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 ZNF75DP51815 510 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 STAG1Q8WVM7 1258 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 LRRC45Q96CN5 670 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 PPFIA2O75334 1257 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 ANAPC15P60006 121 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 GNGT1P63211 74 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 PPP1R7Q15435 360 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
POLR1B-216ENST00000537335 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
POLR1B-216ENST00000537335 TNNC1P63316 161 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 MUM1Q2TAK8 710 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 MED4Q9NPJ6 270 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 E7EVH7 732 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 LARSQ9P2J5 1176 aaKnown RBP13.42□□□□□ -0.26
POLR1B-216ENST00000537335 KCNK9Q9NPC2 374 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 FAF1Q9UNN5 650 aaPredicted RBP13.42□□□□□ -0.26
POLR1B-216ENST00000537335 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
POLR1B-216ENST00000537335 COG7P83436 770 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 SSH1Q8WYL5 1049 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
POLR1B-216ENST00000537335 NKIRAS1Q9NYS0 192 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 FERP16591 822 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
POLR1B-216ENST00000537335 ARHGAP24Q8N264 748 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 PAF1Q8N7H5 531 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 ARHGEF2Q92974 986 aaKnown RBP13.41□□□□□ -0.26
POLR1B-216ENST00000537335 SMIM23A6NLE4 172 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 CCT5P48643 541 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms