RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 DDB1Q16531 1140 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
SMG6-203ENST00000536871 RBM8AQ9Y5S9 174 aaKnown RBP16.29■□□□□ 0.2
SMG6-203ENST00000536871 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
SMG6-203ENST00000536871 TOM1O60784 492 aa16.28■□□□□ 0.2
SMG6-203ENST00000536871 CSF1RP07333 972 aa16.28■□□□□ 0.2
SMG6-203ENST00000536871 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
SMG6-203ENST00000536871 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
SMG6-203ENST00000536871 KBTBD3Q8NAB2 608 aa16.28■□□□□ 0.2
SMG6-203ENST00000536871 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
SMG6-203ENST00000536871 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
SMG6-203ENST00000536871 WDR33Q9C0J8 1336 aaKnown RBP16.27■□□□□ 0.2
SMG6-203ENST00000536871 BRD1O95696 1058 aa16.27■□□□□ 0.2
SMG6-203ENST00000536871 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
SMG6-203ENST00000536871 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
SMG6-203ENST00000536871 RUFY3Q7L099 469 aa16.27■□□□□ 0.2
SMG6-203ENST00000536871 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
SMG6-203ENST00000536871 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
SMG6-203ENST00000536871 ITGB4P16144 1822 aa16.27■□□□□ 0.2
SMG6-203ENST00000536871 ZNF609O15014 1411 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 FSD2A1L4K1 749 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.19
SMG6-203ENST00000536871 PTH1RQ03431 593 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.19
SMG6-203ENST00000536871 USPL1Q5W0Q7 1092 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 FAM227BQ96M60 508 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 HELLSQ9NRZ9 838 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 PDRG1Q9NUG6 133 aa16.27■□□□□ 0.19
SMG6-203ENST00000536871 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.19
SMG6-203ENST00000536871 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
SMG6-203ENST00000536871 PHLPP1O60346 1717 aa16.26■□□□□ 0.19
SMG6-203ENST00000536871 FAM43AQ8N2R8 423 aa16.26■□□□□ 0.19
SMG6-203ENST00000536871 JAKMIP1Q96N16 626 aaKnown RBP16.26■□□□□ 0.19
SMG6-203ENST00000536871 A0A0D9SFI3 127 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 MRE11P49959 708 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 AK2P54819 239 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 MCMDC2Q4G0Z9 681 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
SMG6-203ENST00000536871 NRAPQ86VF7 1730 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 RPAP1Q9BWH6 1393 aaPredicted RBP16.25■□□□□ 0.19
SMG6-203ENST00000536871 SLC27A2O14975 620 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 NLRP10Q86W26 655 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 NEUROD6Q96NK8 337 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 ZNF330Q9Y3S2 320 aaPredicted RBP16.25■□□□□ 0.19
SMG6-203ENST00000536871 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
SMG6-203ENST00000536871 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
SMG6-203ENST00000536871 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
SMG6-203ENST00000536871 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
SMG6-203ENST00000536871 TAF5LO75529 589 aa16.24■□□□□ 0.19
SMG6-203ENST00000536871 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
SMG6-203ENST00000536871 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
SMG6-203ENST00000536871 MBD3O95983 291 aa16.23■□□□□ 0.19
SMG6-203ENST00000536871 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
SMG6-203ENST00000536871 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
SMG6-203ENST00000536871 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
SMG6-203ENST00000536871 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
SMG6-203ENST00000536871 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
SMG6-203ENST00000536871 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
SMG6-203ENST00000536871 HMGB1P09429 215 aaKnown RBP16.22■□□□□ 0.19
SMG6-203ENST00000536871 IFIT1P09914 478 aaKnown RBP16.22■□□□□ 0.19
SMG6-203ENST00000536871 GLIPR1L2Q4G1C9 344 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 RTN4Q9NQC3 1192 aaKnown RBP16.22■□□□□ 0.19
SMG6-203ENST00000536871 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
SMG6-203ENST00000536871 ZDHHC9Q9Y397 364 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 SLIT2O94813 1529 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 ANKRD18BA2A2Z9 1011 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 RGL2O15211 777 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 PDE8AO60658 829 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 DZIP3Q86Y13 1208 aaKnown RBP16.22■□□□□ 0.19
SMG6-203ENST00000536871 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 DSCC1Q9BVC3 393 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 SMC3Q9UQE7 1217 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
SMG6-203ENST00000536871 CTSWP56202 376 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 LRRC24Q50LG9 513 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 GORABQ5T7V8 394 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 ZNF512BQ96KM6 892 aaPredicted RBP16.21■□□□□ 0.19
SMG6-203ENST00000536871 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 LMBRD1Q9NUN5 540 aa16.21■□□□□ 0.19
SMG6-203ENST00000536871 ADAMTS2O95450 1211 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 ARXQ96QS3 562 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 GZF1Q9H116 711 aaPredicted RBP16.2■□□□□ 0.18
SMG6-203ENST00000536871 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
SMG6-203ENST00000536871 NOL8Q76FK4 1167 aaKnown RBP16.2■□□□□ 0.18
SMG6-203ENST00000536871 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
SMG6-203ENST00000536871 ANKRD36CQ5JPF3 1778 aa16.2■□□□□ 0.18
SMG6-203ENST00000536871 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms