RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 COL4A5P29400 1685 aa17.01■□□□□ 0.31
MRPS35-202ENST00000536569 ADAMTSL1Q8N6G6 1762 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
MRPS35-202ENST00000536569 ANP32CO43423 234 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 CCDC184Q52MB2 194 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
MRPS35-202ENST00000536569 WWC1Q8IX03 1113 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
MRPS35-202ENST00000536569 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
MRPS35-202ENST00000536569 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
MRPS35-202ENST00000536569 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
MRPS35-202ENST00000536569 ITGBL1O95965 494 aaPredicted RBP16.99■□□□□ 0.31
MRPS35-202ENST00000536569 AOC3Q16853 763 aa16.99■□□□□ 0.31
MRPS35-202ENST00000536569 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
MRPS35-202ENST00000536569 GJA3Q9Y6H8 435 aa16.99■□□□□ 0.31
MRPS35-202ENST00000536569 USP50Q70EL3 339 aaPredicted RBP16.98■□□□□ 0.31
MRPS35-202ENST00000536569 METTL22Q9BUU2 404 aaPredicted RBP16.98■□□□□ 0.31
MRPS35-202ENST00000536569 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
MRPS35-202ENST00000536569 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
MRPS35-202ENST00000536569 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
MRPS35-202ENST00000536569 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
MRPS35-202ENST00000536569 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
MRPS35-202ENST00000536569 SCNN1DP51172 638 aa16.97■□□□□ 0.31
MRPS35-202ENST00000536569 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
MRPS35-202ENST00000536569 STK31Q9BXU1 1019 aa16.97■□□□□ 0.31
MRPS35-202ENST00000536569 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
MRPS35-202ENST00000536569 TNIP1Q15025 636 aa16.96■□□□□ 0.31
MRPS35-202ENST00000536569 CNTROBQ8N137 903 aa16.96■□□□□ 0.31
MRPS35-202ENST00000536569 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
MRPS35-202ENST00000536569 MYD88Q99836 296 aa16.96■□□□□ 0.31
MRPS35-202ENST00000536569 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
MRPS35-202ENST00000536569 RPS8P62241 208 aaKnown RBP16.95■□□□□ 0.3
MRPS35-202ENST00000536569 CXCL9Q07325 125 aa16.95■□□□□ 0.3
MRPS35-202ENST00000536569 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
MRPS35-202ENST00000536569 CELF1Q92879 486 aaKnown RBP16.95■□□□□ 0.3
MRPS35-202ENST00000536569 PDE8AO60658 829 aa16.94■□□□□ 0.3
MRPS35-202ENST00000536569 EPS15P42566 896 aa16.94■□□□□ 0.3
MRPS35-202ENST00000536569 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
MRPS35-202ENST00000536569 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
MRPS35-202ENST00000536569 CIAPIN1Q6FI81 312 aa16.94■□□□□ 0.3
MRPS35-202ENST00000536569 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
MRPS35-202ENST00000536569 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
MRPS35-202ENST00000536569 ADARB2Q9NS39 739 aaKnown RBP16.94■□□□□ 0.3
MRPS35-202ENST00000536569 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
MRPS35-202ENST00000536569 CNTNAP1P78357 1384 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 WASHC4Q2M389 1173 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
MRPS35-202ENST00000536569 MAP1SQ66K74 1059 aaPredicted RBP16.93■□□□□ 0.3
MRPS35-202ENST00000536569 EYA3Q99504 573 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
MRPS35-202ENST00000536569 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
MRPS35-202ENST00000536569 PI4KAP2A4QPH2 592 aa16.92■□□□□ 0.3
MRPS35-202ENST00000536569 PI4KAP1Q8N8J0 262 aa16.92■□□□□ 0.3
MRPS35-202ENST00000536569 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
MRPS35-202ENST00000536569 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
MRPS35-202ENST00000536569 TAF1P21675 1872 aa16.91■□□□□ 0.3
MRPS35-202ENST00000536569 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
MRPS35-202ENST00000536569 GMPSP49915 693 aaPredicted RBP16.9■□□□□ 0.3
MRPS35-202ENST00000536569 GPSM2P81274 684 aa16.9■□□□□ 0.3
MRPS35-202ENST00000536569 ZC3H15Q8WU90 426 aaKnown RBP16.9■□□□□ 0.3
MRPS35-202ENST00000536569 DPF2Q92785 391 aa16.9■□□□□ 0.3
MRPS35-202ENST00000536569 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
MRPS35-202ENST00000536569 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
MRPS35-202ENST00000536569 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 YDJCA8MPS7 323 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 RAD17O75943 681 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 IGKV5-2P06315 115 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 HSPA1AP0DMV8 641 aaKnown RBP16.89■□□□□ 0.29
MRPS35-202ENST00000536569 HSPA1BP0DMV9 641 aaKnown RBP16.89■□□□□ 0.29
MRPS35-202ENST00000536569 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
MRPS35-202ENST00000536569 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
MRPS35-202ENST00000536569 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
MRPS35-202ENST00000536569 ZC3H12CQ9C0D7 883 aaKnown RBP16.88■□□□□ 0.29
MRPS35-202ENST00000536569 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
MRPS35-202ENST00000536569 PCNTO95613 3336 aa16.88■□□□□ 0.29
MRPS35-202ENST00000536569 NEURL1BA8MQ27 555 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 H7C1D1 291 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 CTSWP56202 376 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 FLIIQ13045 1269 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 GGA1Q9UJY5 639 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 CACNA1FO60840 1977 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 RTL9Q8NET4 1388 aa16.87■□□□□ 0.29
MRPS35-202ENST00000536569 H7C1W4 665 aa16.86■□□□□ 0.29
MRPS35-202ENST00000536569 VAMP4O75379 141 aa16.86■□□□□ 0.29
MRPS35-202ENST00000536569 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
MRPS35-202ENST00000536569 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
MRPS35-202ENST00000536569 COL4A1P02462 1669 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 PSMD14O00487 310 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 ECE2O60344 883 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms