RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ZNF34Q8IZ26 560 aa27.5■■□□□ 1.99
HMGA2-206ENST00000536545 SNRKQ9NRH2 765 aa27.5■■□□□ 1.99
HMGA2-206ENST00000536545 RFX7Q2KHR2 1363 aa27.5■■□□□ 1.99
HMGA2-206ENST00000536545 CCDC57Q2TAC2 916 aa27.49■■□□□ 1.99
HMGA2-206ENST00000536545 SYNE4Q8N205 404 aa27.48■■□□□ 1.99
HMGA2-206ENST00000536545 HSP90AA1P07900 732 aaKnown RBP27.48■■□□□ 1.99
HMGA2-206ENST00000536545 KIAA1211Q6ZU35 1233 aa27.48■■□□□ 1.99
HMGA2-206ENST00000536545 CERKQ8TCT0 537 aa27.48■■□□□ 1.99
HMGA2-206ENST00000536545 FSD1Q9BTV5 496 aa27.48■■□□□ 1.99
HMGA2-206ENST00000536545 PUS3Q9BZE2 481 aaKnown RBP27.48■■□□□ 1.99
HMGA2-206ENST00000536545 USP21Q9UK80 565 aa27.48■■□□□ 1.99
HMGA2-206ENST00000536545 BCORQ6W2J9 1755 aa27.47■■□□□ 1.99
HMGA2-206ENST00000536545 LRP5O75197 1615 aa27.46■■□□□ 1.99
HMGA2-206ENST00000536545 CTSWP56202 376 aa27.46■■□□□ 1.99
HMGA2-206ENST00000536545 NMIQ13287 307 aaPredicted RBP27.46■■□□□ 1.99
HMGA2-206ENST00000536545 HAUS7Q99871 368 aa27.46■■□□□ 1.99
HMGA2-206ENST00000536545 NHSQ6T4R5 1651 aa27.46■■□□□ 1.99
HMGA2-206ENST00000536545 RIC1Q4ADV7 1423 aa27.46■■□□□ 1.99
HMGA2-206ENST00000536545 MED23Q9ULK4 1368 aa27.46■■□□□ 1.99
HMGA2-206ENST00000536545 NEK4P51957 841 aa27.45■■□□□ 1.99
HMGA2-206ENST00000536545 FAM227BQ96M60 508 aa27.45■■□□□ 1.99
HMGA2-206ENST00000536545 IRS4O14654 1257 aaPredicted RBP27.45■■□□□ 1.98
HMGA2-206ENST00000536545 CAMTA2O94983 1202 aa27.45■■□□□ 1.98
HMGA2-206ENST00000536545 TRMT112Q9UI30 125 aaKnown RBP27.45■■□□□ 1.98
HMGA2-206ENST00000536545 IFIT5Q13325 482 aaKnown RBP27.44■■□□□ 1.98
HMGA2-206ENST00000536545 TTLL11Q8NHH1 800 aa27.44■■□□□ 1.98
HMGA2-206ENST00000536545 EDC3Q96F86 508 aaKnown RBP27.44■■□□□ 1.98
HMGA2-206ENST00000536545 FOXD4L1Q9NU39 408 aa27.44■■□□□ 1.98
HMGA2-206ENST00000536545 CCDC171Q6TFL3 1326 aa27.43■■□□□ 1.98
HMGA2-206ENST00000536545 A0A0D9SFI3 127 aa27.43■■□□□ 1.98
HMGA2-206ENST00000536545 PTH1RQ03431 593 aa27.43■■□□□ 1.98
HMGA2-206ENST00000536545 IL27Q8NEV9 243 aa27.43■■□□□ 1.98
HMGA2-206ENST00000536545 SNX14Q9Y5W7 946 aa27.43■■□□□ 1.98
HMGA2-206ENST00000536545 MCM2P49736 904 aa27.43■■□□□ 1.98
HMGA2-206ENST00000536545 CCDC85AQ96PX6 553 aaPredicted RBP27.43■■□□□ 1.98
HMGA2-206ENST00000536545 BTAF1O14981 1849 aa27.42■■□□□ 1.98
HMGA2-206ENST00000536545 A0A1B0GUL7 405 aa27.41■■□□□ 1.98
HMGA2-206ENST00000536545 GREM2Q9H772 168 aa27.41■■□□□ 1.98
HMGA2-206ENST00000536545 CEP126Q9P2H0 1117 aa27.41■■□□□ 1.98
HMGA2-206ENST00000536545 SPEF2Q9C093 1822 aa27.41■■□□□ 1.98
HMGA2-206ENST00000536545 LAMB2P55268 1798 aa27.41■■□□□ 1.98
HMGA2-206ENST00000536545 PDE8AO60658 829 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 TIMM10P62072 90 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 RAB3GAP1Q15042 981 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 KCNB2Q92953 911 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 NEUROD6Q96NK8 337 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 TAF7LQ5H9L4 462 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 RASEFQ8IZ41 740 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 LINC00116Q8NCU8 138 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 AK7Q96M32 723 aa27.4■■□□□ 1.98
HMGA2-206ENST00000536545 DNAJC2Q99543 621 aaKnown RBP27.4■■□□□ 1.98
HMGA2-206ENST00000536545 ITGA6P23229 1130 aa27.39■■□□□ 1.98
HMGA2-206ENST00000536545 NDUFB9Q9Y6M9 179 aa27.39■■□□□ 1.98
HMGA2-206ENST00000536545 UPF3BQ9BZI7 483 aaKnown RBP27.38■■□□□ 1.97
HMGA2-206ENST00000536545 DDX60Q8IY21 1712 aaKnown RBP27.38■■□□□ 1.97
HMGA2-206ENST00000536545 PARP10Q53GL7 1025 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 SUSD4Q5VX71 490 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 AKAP2Q9Y2D5 859 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 CNTNAP4Q9C0A0 1308 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 SCN7AQ01118 1682 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 ANKRD18BA2A2Z9 1011 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 HSPA1LP34931 641 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 PTF1AQ7RTS3 328 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.37■■□□□ 1.97
HMGA2-206ENST00000536545 RIPOR2Q9Y4F9 1068 aa27.37■■□□□ 1.97
HMGA2-206ENST00000536545 SH3TC1Q8TE82 1336 aa27.36■■□□□ 1.97
HMGA2-206ENST00000536545 KBTBD3Q8NAB2 608 aa27.36■■□□□ 1.97
HMGA2-206ENST00000536545 MAP4K1Q92918 833 aa27.36■■□□□ 1.97
HMGA2-206ENST00000536545 TMX3Q96JJ7 454 aa27.36■■□□□ 1.97
HMGA2-206ENST00000536545 ATRNO75882 1429 aa27.36■■□□□ 1.97
HMGA2-206ENST00000536545 MCM4P33991 863 aa27.35■■□□□ 1.97
HMGA2-206ENST00000536545 NECTIN1Q15223 517 aa27.35■■□□□ 1.97
HMGA2-206ENST00000536545 TICAM2Q86XR7 235 aa27.35■■□□□ 1.97
HMGA2-206ENST00000536545 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
HMGA2-206ENST00000536545 DDX46Q7L014 1031 aaKnown RBP27.35■■□□□ 1.97
HMGA2-206ENST00000536545 ZNF589Q86UQ0 364 aaPredicted RBP27.35■■□□□ 1.97
HMGA2-206ENST00000536545 UTP14AQ9BVJ6 771 aaKnown RBP27.35■■□□□ 1.97
HMGA2-206ENST00000536545 PAG1Q9NWQ8 432 aa27.35■■□□□ 1.97
HMGA2-206ENST00000536545 RBM8AQ9Y5S9 174 aaKnown RBP27.35■■□□□ 1.97
HMGA2-206ENST00000536545 CUL4AQ13619 759 aa27.34■■□□□ 1.97
HMGA2-206ENST00000536545 PRPF40BQ6NWY9 871 aaKnown RBP27.34■■□□□ 1.97
HMGA2-206ENST00000536545 TNPO1Q92973 898 aaKnown RBP27.34■■□□□ 1.97
HMGA2-206ENST00000536545 ABCC12Q96J65 1359 aa27.34■■□□□ 1.97
HMGA2-206ENST00000536545 GJD4Q96KN9 370 aaPredicted RBP27.33■■□□□ 1.97
HMGA2-206ENST00000536545 TTC14Q96N46 770 aa27.33■■□□□ 1.97
HMGA2-206ENST00000536545 CWC22Q9HCG8 908 aaKnown RBP27.33■■□□□ 1.97
HMGA2-206ENST00000536545 AFF2P51816 1311 aa27.33■■□□□ 1.97
HMGA2-206ENST00000536545 NTSR2O95665 410 aa27.32■■□□□ 1.96
HMGA2-206ENST00000536545 ADORA1P30542 326 aa27.32■■□□□ 1.96
HMGA2-206ENST00000536545 LDHAL6AQ6ZMR3 332 aa27.32■■□□□ 1.96
HMGA2-206ENST00000536545 ZGPATQ8N5A5 531 aaKnown RBP27.32■■□□□ 1.96
HMGA2-206ENST00000536545 VGLL2Q8N8G2 317 aa27.32■■□□□ 1.96
HMGA2-206ENST00000536545 XAGE2Q96GT9 111 aa27.32■■□□□ 1.96
HMGA2-206ENST00000536545 GOLIM4O00461 696 aa27.31■■□□□ 1.96
HMGA2-206ENST00000536545 IFIT1P09914 478 aaKnown RBP27.31■■□□□ 1.96
HMGA2-206ENST00000536545 DEKP35659 375 aaKnown RBP27.31■■□□□ 1.96
HMGA2-206ENST00000536545 METTL24Q5JXM2 366 aa27.31■■□□□ 1.96
HMGA2-206ENST00000536545 CREB3L3Q68CJ9 461 aa27.31■■□□□ 1.96
HMGA2-206ENST00000536545 ZNF652Q9Y2D9 606 aa27.31■■□□□ 1.96
HMGA2-206ENST00000536545 TM6SF1Q9BZW5 370 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms