RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
CD4-204ENST00000535707 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
CD4-204ENST00000535707 CWC25Q9NXE8 425 aaPredicted RBP11.15□□□□□ -0.62
CD4-204ENST00000535707 SRP68Q9UHB9 627 aaKnown RBP11.15□□□□□ -0.62
CD4-204ENST00000535707 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
CD4-204ENST00000535707 GCKRQ14397 625 aa11.14□□□□□ -0.63
CD4-204ENST00000535707 NFIXQ14938 502 aa11.14□□□□□ -0.63
CD4-204ENST00000535707 TBC1D9BQ66K14 1250 aa11.14□□□□□ -0.63
CD4-204ENST00000535707 TPTE2Q6XPS3 522 aa11.14□□□□□ -0.63
CD4-204ENST00000535707 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
CD4-204ENST00000535707 MYD88Q99836 296 aa11.14□□□□□ -0.63
CD4-204ENST00000535707 NIP7Q9Y221 180 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD4-204ENST00000535707 AFDNP55196 1824 aaKnown RBP11.14□□□□□ -0.63
CD4-204ENST00000535707 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 CDHR2Q9BYE9 1310 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 F6X3S4 739 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
CD4-204ENST00000535707 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
CD4-204ENST00000535707 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 SLC4A10Q6U841 1118 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
CD4-204ENST00000535707 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 LAMB2P55268 1798 aa11.13□□□□□ -0.63
CD4-204ENST00000535707 H7C1W4 665 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 GRM8O00222 908 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 POLRMTO00411 1230 aaKnown RBP11.12□□□□□ -0.63
CD4-204ENST00000535707 NTSR2O95665 410 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 GNAI3P08754 354 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 POLD1P28340 1107 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
CD4-204ENST00000535707 SLC10A5Q5PT55 438 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 UTP14AQ9BVJ6 771 aaKnown RBP11.12□□□□□ -0.63
CD4-204ENST00000535707 PDZRN3Q9UPQ7 1066 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
CD4-204ENST00000535707 SUPT16HQ9Y5B9 1047 aaKnown RBP11.12□□□□□ -0.63
CD4-204ENST00000535707 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
CD4-204ENST00000535707 SH3TC1Q8TE82 1336 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 ATP5J2-PTCD1G3V325 749 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 SERPINB2P05120 415 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 MMP10P09238 476 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 CWF19L2Q2TBE0 894 aaKnown RBP11.11□□□□□ -0.63
CD4-204ENST00000535707 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 TMEM57Q8N5G2 664 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
CD4-204ENST00000535707 ZBTB7BO15156 539 aaPredicted RBP11.1□□□□□ -0.63
CD4-204ENST00000535707 PLIN1O60240 522 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 RLBP1P12271 317 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 CASP7P55210 303 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 DDR1Q08345 913 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
CD4-204ENST00000535707 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
CD4-204ENST00000535707 CNBD1Q8NA66 436 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 PDGFDQ9GZP0 370 aaPredicted RBP11.1□□□□□ -0.63
CD4-204ENST00000535707 USP44Q9H0E7 712 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 SPON1Q9HCB6 807 aa11.1□□□□□ -0.63
CD4-204ENST00000535707 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
CD4-204ENST00000535707 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
CD4-204ENST00000535707 KIF13BQ9NQT8 1826 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 KLRG2A4D1S0 409 aaPredicted RBP11.09□□□□□ -0.63
CD4-204ENST00000535707 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
CD4-204ENST00000535707 GPTP24298 496 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 ST5P78524 1137 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 ITPRIPQ8IWB1 547 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 BRIP1Q9BX63 1249 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 LRP5O75197 1615 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 C10orf71Q711Q0 1435 aa11.09□□□□□ -0.63
CD4-204ENST00000535707 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
CD4-204ENST00000535707 UBTFL1P0CB47 393 aaPredicted RBP11.08□□□□□ -0.64
CD4-204ENST00000535707 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
CD4-204ENST00000535707 PTGER2P43116 358 aa11.08□□□□□ -0.64
CD4-204ENST00000535707 ERICH6BQ5W0A0 696 aa11.08□□□□□ -0.64
CD4-204ENST00000535707 PRR5LQ6MZQ0 368 aa11.08□□□□□ -0.64
CD4-204ENST00000535707 BICDL1Q6ZP65 573 aa11.08□□□□□ -0.64
CD4-204ENST00000535707 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
CD4-204ENST00000535707 DDX60Q8IY21 1712 aaKnown RBP11.08□□□□□ -0.64
CD4-204ENST00000535707 PDE8AO60658 829 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 ZBTB7AO95365 584 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 PDE6BP35913 854 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 MTX1Q13505 466 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 C20orf194Q5TEA3 1177 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 UBE3BQ7Z3V4 1068 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 CD2APQ9Y5K6 639 aa11.07□□□□□ -0.64
CD4-204ENST00000535707 IRS4O14654 1257 aaPredicted RBP11.06□□□□□ -0.64
CD4-204ENST00000535707 GNAI2P04899 355 aa11.06□□□□□ -0.64
CD4-204ENST00000535707 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
CD4-204ENST00000535707 SF3B3Q15393 1217 aaKnown RBP11.06□□□□□ -0.64
CD4-204ENST00000535707 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
CD4-204ENST00000535707 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
CD4-204ENST00000535707 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
CD4-204ENST00000535707 FAM89AQ96GI7 184 aa11.06□□□□□ -0.64
CD4-204ENST00000535707 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
CD4-204ENST00000535707 NLRP3Q96P20 1036 aa11.06□□□□□ -0.64
CD4-204ENST00000535707 FAM117AQ9C073 453 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms