RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 UBAP2LQ14157 1087 aaKnown RBP6.3□□□□□ -1.4
SNHG1-201ENST00000535076 TLR1Q15399 786 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 RGL3Q3MIN7 710 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 SASS6Q6UVJ0 657 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 TBC1D9Q6ZT07 1266 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-201ENST00000535076 TMC1Q8TDI8 760 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 CCDC97Q96F63 343 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-201ENST00000535076 TRAIPQ9BWF2 469 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 GPAMQ9HCL2 828 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 STK26Q9P289 416 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 RPS6KL1Q9Y6S9 549 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 USP17L5A8MUK1 530 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 MAGEA8P43361 318 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 PSMC1P62191 440 aaKnown RBP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 WRNQ14191 1432 aaPredicted RBP eCLIP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 WDR44Q5JSH3 913 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 CCDC181Q5TID7 509 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 DNAJC14Q6Y2X3 702 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 CCDC91Q7Z6B0 441 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 PDCL2Q8N4E4 241 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 SERTAD1Q9UHV2 236 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 IQSEC3Q9UPP2 1182 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
SNHG1-201ENST00000535076 IBTKQ9P2D0 1353 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-201ENST00000535076 F11P03951 625 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 PAX7P23759 505 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 MSX1P28360 303 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 GSK3AP49840 483 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 HMGN5P82970 282 aaKnown RBP6.28□□□□□ -1.4
SNHG1-201ENST00000535076 ESCO1Q5FWF5 840 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 KLHL10Q6JEL2 608 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 GOLGA6L1Q8N7Z2 621 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 KLHL23Q8NBE8 558 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 ZCRB1Q8TBF4 217 aaKnown RBP6.28□□□□□ -1.4
SNHG1-201ENST00000535076 HCN2Q9UL51 889 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
SNHG1-201ENST00000535076 UQCRHLA0A096LP55 91 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 GOLGA6L22H0YM25 854 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 ADAMTS2O95450 1211 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 UQCRHP07919 91 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 ATP4AP20648 1035 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 GTF2IP78347 998 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 HSP90AB2PQ58FF8 381 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 TMEM214Q6NUQ4 689 aaKnown RBP6.27□□□□□ -1.41
SNHG1-201ENST00000535076 LYPD4Q6UWN0 246 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 EP400NLQ6ZTU2 488 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 ZNF771Q7L3S4 317 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-201ENST00000535076 NLRP13Q86W25 1043 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 PROSER2Q86WR7 435 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-201ENST00000535076 CHMP4CQ96CF2 233 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 AGAP3Q96P47 875 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 SLC4A9Q96Q91 983 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 PPP1R9BQ96SB3 815 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 TMX4Q9H1E5 349 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-201ENST00000535076 RUBCNLQ9H714 662 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 OGFRQ9NZT2 677 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 SUFUQ9UMX1 484 aa6.27□□□□□ -1.41
SNHG1-201ENST00000535076 IL16Q14005 1332 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 SCAPERQ9BY12 1400 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 USP17L3A6NCW0 530 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 USP17L4A6NCW7 530 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 H0YHG0 523 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 ZBTB7BO15156 539 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-201ENST00000535076 CCP110O43303 1012 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 EPB41L2O43491 1005 aaKnown RBP6.26□□□□□ -1.41
SNHG1-201ENST00000535076 ARHGEF15O94989 841 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 ABCD1P33897 745 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 PLA2G4AP47712 749 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 SMTNP53814 917 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 CLDN10P78369 228 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 CCDC173Q0VFZ6 552 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 GNASQ5JWF2 1037 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 JAKMIP3Q5VZ66 844 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 ZKSCAN2Q63HK3 967 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 USP17L2Q6R6M4 530 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 USP17L1Q7RTZ2 530 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.26□□□□□ -1.412e-85■□□□□ 9.7
SNHG1-201ENST00000535076 RHBDD1Q8TEB9 315 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 KLRG1Q96E93 195 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 CXorf56Q9H5V9 222 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 ZNF358Q9NW07 568 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 SUN2Q9UH99 717 aa6.26□□□□□ -1.41
SNHG1-201ENST00000535076 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 A0A1B0GTH6 734 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 MARCH6O60337 910 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 FRAT2O75474 233 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-201ENST00000535076 DKK1O94907 266 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 MSNP26038 577 aaKnown RBP6.25□□□□□ -1.41
SNHG1-201ENST00000535076 COPB2P35606 906 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 EPHA4P54764 986 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 IRX1P78414 480 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-201ENST00000535076 SF3B2Q13435 895 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms