RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 USP25Q9UHP3 1055 aa19.99■□□□□ 0.79
PDZD3-214ENST00000534790 CADPS2Q86UW7 1296 aa19.99■□□□□ 0.79
PDZD3-214ENST00000534790 PLBD2Q8NHP8 589 aa19.99■□□□□ 0.79
PDZD3-214ENST00000534790 PIBF1Q8WXW3 757 aa19.99■□□□□ 0.79
PDZD3-214ENST00000534790 FAM227BQ96M60 508 aa19.99■□□□□ 0.79
PDZD3-214ENST00000534790 MYRIPQ8NFW9 859 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 BOLA2Q9H3K6 86 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 MYL6BP14649 208 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 RFX5P48382 616 aaPredicted RBP19.98■□□□□ 0.79
PDZD3-214ENST00000534790 SLC39A6Q13433 755 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 ME3Q16798 604 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 TNNI3KQ59H18 835 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 U3KPZ7 1027 aaPredicted RBP19.98■□□□□ 0.79
PDZD3-214ENST00000534790 FPGT-TNNI3KV9GXZ4 949 aa19.98■□□□□ 0.79
PDZD3-214ENST00000534790 LARGE1O95461 756 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 KRT85P78386 507 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 PRIMPOLQ96LW4 560 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 GPR108Q9NPR9 543 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 CSB-PGBD3P0DP91 1061 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 SPEF2Q9C093 1822 aa19.97■□□□□ 0.79
PDZD3-214ENST00000534790 A0A0D9SFI3 127 aa19.96■□□□□ 0.79
PDZD3-214ENST00000534790 HMGN5P82970 282 aaKnown RBP19.96■□□□□ 0.79
PDZD3-214ENST00000534790 CHMP4CQ96CF2 233 aa19.96■□□□□ 0.79
PDZD3-214ENST00000534790 ADCY5O95622 1261 aa19.96■□□□□ 0.79
PDZD3-214ENST00000534790 PTPN12Q05209 780 aaKnown RBP19.96■□□□□ 0.79
PDZD3-214ENST00000534790 NOLC1Q14978 699 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDZD3-214ENST00000534790 GLI3P10071 1580 aa19.96■□□□□ 0.79
PDZD3-214ENST00000534790 UBR2Q8IWV8 1755 aa19.95■□□□□ 0.78
PDZD3-214ENST00000534790 LARP1BQ659C4 914 aaKnown RBP19.95■□□□□ 0.78
PDZD3-214ENST00000534790 SIL1Q9H173 461 aa19.95■□□□□ 0.78
PDZD3-214ENST00000534790 TPCN1Q9ULQ1 816 aa19.95■□□□□ 0.78
PDZD3-214ENST00000534790 TLR7Q9NYK1 1049 aaKnown RBP19.95■□□□□ 0.78
PDZD3-214ENST00000534790 TAF5LO75529 589 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 HMGB1P09429 215 aaKnown RBP19.94■□□□□ 0.78
PDZD3-214ENST00000534790 HCLS1P14317 486 aaPredicted RBP19.94■□□□□ 0.78
PDZD3-214ENST00000534790 CPA1P15085 419 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 CABP4P57796 275 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 MPNDQ8N594 471 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 ZNF830Q96NB3 372 aaPredicted RBP19.94■□□□□ 0.78
PDZD3-214ENST00000534790 HAUS7Q99871 368 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 SCAND2PQ9GZW5 306 aaPredicted RBP19.94■□□□□ 0.78
PDZD3-214ENST00000534790 FIBPO43427 364 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 NUP188Q5SRE5 1749 aa19.94■□□□□ 0.78
PDZD3-214ENST00000534790 ARID3AQ99856 593 aa19.93■□□□□ 0.78
PDZD3-214ENST00000534790 PALLDQ8WX93 1383 aa19.93■□□□□ 0.78
PDZD3-214ENST00000534790 SH3TC1Q8TE82 1336 aa19.93■□□□□ 0.78
PDZD3-214ENST00000534790 EPHA10Q5JZY3 1008 aa19.93■□□□□ 0.78
PDZD3-214ENST00000534790 TPM3P06753 285 aa19.92■□□□□ 0.78
PDZD3-214ENST00000534790 ST3GAL1Q11201 340 aa19.92■□□□□ 0.78
PDZD3-214ENST00000534790 TTC12Q9H892 705 aaPredicted RBP19.92■□□□□ 0.78
PDZD3-214ENST00000534790 DBNLQ9UJU6 430 aaKnown RBP19.92■□□□□ 0.78
PDZD3-214ENST00000534790 USP16Q9Y5T5 823 aa19.92■□□□□ 0.78
PDZD3-214ENST00000534790 VPS37CA5D8V6 355 aaPredicted RBP19.92■□□□□ 0.78
PDZD3-214ENST00000534790 CYP27B1O15528 508 aa19.92■□□□□ 0.78
PDZD3-214ENST00000534790 DNM1Q05193 864 aaKnown RBP19.92■□□□□ 0.78
PDZD3-214ENST00000534790 MCMDC2Q4G0Z9 681 aa19.92■□□□□ 0.78
PDZD3-214ENST00000534790 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
PDZD3-214ENST00000534790 SPATA31A3Q5VYP0 1347 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 A0A087WZG4 1122 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 CASP7P55210 303 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 TPRNQ4KMQ1 711 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 SMAP1Q8IYB5 467 aaPredicted RBP19.91■□□□□ 0.78
PDZD3-214ENST00000534790 ATG3Q9NT62 314 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 TFCP2Q12800 502 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 UBE3BQ7Z3V4 1068 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 PCDH11XQ9BZA7 1347 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 PCDH11YQ9BZA8 1340 aa19.91■□□□□ 0.78
PDZD3-214ENST00000534790 ERVV-2B6SEH9 535 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 H7C1W4 665 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 KDM4AO75164 1064 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 LLPHQ9BRT6 129 aaKnown RBP19.9■□□□□ 0.78
PDZD3-214ENST00000534790 FUCA2Q9BTY2 467 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 CCDC94Q9BW85 323 aaPredicted RBP19.9■□□□□ 0.78
PDZD3-214ENST00000534790 HELLSQ9NRZ9 838 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
PDZD3-214ENST00000534790 CCDC192P0DO97 292 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 TOB2Q14106 344 aaPredicted RBP19.9■□□□□ 0.78
PDZD3-214ENST00000534790 NEK1Q96PY6 1258 aa19.9■□□□□ 0.78
PDZD3-214ENST00000534790 KBTBD3Q8NAB2 608 aa19.89■□□□□ 0.78
PDZD3-214ENST00000534790 LARP6Q9BRS8 491 aaKnown RBP19.89■□□□□ 0.78
PDZD3-214ENST00000534790 KIF3AQ9Y496 699 aa19.89■□□□□ 0.78
PDZD3-214ENST00000534790 GTF2F1P35269 517 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDZD3-214ENST00000534790 SPTLC3Q9NUV7 552 aa19.89■□□□□ 0.77
PDZD3-214ENST00000534790 STRCP1A6NGW2 1772 aa19.89■□□□□ 0.77
PDZD3-214ENST00000534790 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
PDZD3-214ENST00000534790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDZD3-214ENST00000534790 IL15P40933 162 aaPredicted RBP19.88■□□□□ 0.77
PDZD3-214ENST00000534790 ZNF589Q86UQ0 364 aaPredicted RBP19.88■□□□□ 0.77
PDZD3-214ENST00000534790 NECAB1Q8N987 351 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 ZSCAN16Q9H4T2 348 aaPredicted RBP19.88■□□□□ 0.77
PDZD3-214ENST00000534790 CWC25Q9NXE8 425 aaPredicted RBP19.88■□□□□ 0.77
PDZD3-214ENST00000534790 FBXO3Q9UK99 471 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 TJP1Q07157 1748 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 KLHDC4Q8TBB5 520 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 GTF3C6Q969F1 213 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 DSCC1Q9BVC3 393 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 PRDM4Q9UKN5 801 aa19.88■□□□□ 0.77
PDZD3-214ENST00000534790 CIAO1O76071 339 aa19.87■□□□□ 0.77
PDZD3-214ENST00000534790 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms