RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CHD2	O14647	1828 aa	Known RBP	7.34	□□□□□ -1.24
ECHDC1-223	ENST00000534442	WNT7A	O00755	349 aa		7.33	□□□□□ -1.24
ECHDC1-223	ENST00000534442	CAPN12	Q6ZSI9	719 aa		7.33	□□□□□ -1.24
ECHDC1-223	ENST00000534442	TMEM2	Q9UHN6	1383 aa		7.33	□□□□□ -1.24
ECHDC1-223	ENST00000534442	CDC42BPB	Q9Y5S2	1711 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	WASHC2C	Q9Y4E1	1318 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ADH1C	P00326	375 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	NR3C2	P08235	984 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ADD1	P35611	737 aa	Known RBP	7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	GDF10	P55107	478 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	DHX9	Q08211	1270 aa	Known RBP	7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	FKBP5	Q13451	457 aa	Predicted RBP	7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	NOM1	Q5C9Z4	860 aa	Known RBP	7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SLC17A8	Q8NDX2	589 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	MRGPRX2	Q96LB1	330 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SEPT3	Q9UH03	358 aa		7.32	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ERVK-7	P63135	1459 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	WASL	O00401	505 aa	Predicted RBP	7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SLC19A1	P41440	591 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	EPHA4	P54764	986 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	NR5A1	Q13285	461 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	CCDC116	Q8IYX3	515 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	MTFR1L	Q9H019	292 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ETNK1	Q9HBU6	452 aa		7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	INO80	Q9ULG1	1556 aa	Predicted RBP	7.31	□□□□□ -1.24
ECHDC1-223	ENST00000534442	DCC	P43146	1447 aa		7.3	□□□□□ -1.24
ECHDC1-223	ENST00000534442	INHA	P05111	366 aa		7.3	□□□□□ -1.24
ECHDC1-223	ENST00000534442	MKNK1	Q9BUB5	465 aa		7.3	□□□□□ -1.24
ECHDC1-223	ENST00000534442	EGFL7	Q9UHF1	273 aa		7.3	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SOS2	Q07890	1332 aa	Predicted RBP	7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	C21orf2	O43822	256 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ICMT	O60725	284 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ABL1	P00519	1130 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	IGFBP4	P22692	258 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	RBM25	P49756	843 aa	Known RBP	7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ZNF211	Q13398	564 aa	Predicted RBP	7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ECM1	Q16610	540 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	NLGN2	Q8NFZ4	835 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SLC4A9	Q96Q91	983 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ANO2	Q9NQ90	1003 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SERTAD1	Q9UHV2	236 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	AMOTL2	Q9Y2J4	779 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	USP32	Q8NFA0	1604 aa		7.29	□□□□□ -1.24
ECHDC1-223	ENST00000534442	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	BACH1	O14867	736 aa		7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	CTCF	P49711	727 aa	Predicted RBP	7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SPRYD7	Q5W111	196 aa		7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	FAM196A	Q6ZSG2	479 aa		7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	CYP2U1	Q7Z449	544 aa		7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	SCG3	Q8WXD2	468 aa	Known RBP	7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.28	□□□□□ -1.24
ECHDC1-223	ENST00000534442	NEXMIF	Q5QGS0	1516 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	LAMC1	P11047	1609 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	GNRH1	P01148	92 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	FOXK2	Q01167	660 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	FSTL1	Q12841	308 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	HABP4	Q5JVS0	413 aa	Known RBP	7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	COL26A1	Q96A83	441 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	BIN2	Q9UBW5	565 aa	Predicted RBP	7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	ADGRB3	O60242	1522 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442	SYCP2	Q9BX26	1530 aa		7.27	□□□□□ -1.25
ECHDC1-223	ENST00000534442		H3BRB1	525 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	FOXO3	O43524	673 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	PTCD1	O75127	700 aa	Known RBP	7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	LBX1	P52954	281 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	MARS	P56192	900 aa	Known RBP	7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	MTMR3	Q13615	1198 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	KDF1	Q8NAX2	398 aa	Predicted RBP	7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	GCC1	Q96CN9	775 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	XAGE2	Q96GT9	111 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	TUT1	Q9H6E5	874 aa	Known RBP	7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	RAB6B	Q9NRW1	208 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	PGPEP1	Q9NXJ5	209 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	PKD2L1	Q9P0L9	805 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442	PREX2	Q70Z35	1606 aa		7.26	□□□□□ -1.25
ECHDC1-223	ENST00000534442		A0A1W2PRU2	124 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	IL2RA	P01589	272 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	MMRN1	Q13201	1228 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	NAA30	Q147X3	362 aa	Predicted RBP	7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	NMRK2	Q9NPI5	230 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	HRH3	Q9Y5N1	445 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	EMILIN1	Q9Y6C2	1016 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	TULP4	Q9NRJ4	1543 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442	PLCH1	Q4KWH8	1693 aa		7.25	□□□□□ -1.25
ECHDC1-223	ENST00000534442		A6NJY4	79 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	KIF3B	O15066	747 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	ALDH1A1	P00352	501 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	SMTN	P53814	917 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	NNT	Q13423	1086 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	MTFR1	Q15390	333 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	ESCO1	Q5FWF5	840 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	TBCEL	Q5QJ74	424 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	ZNF697	Q5TEC3	545 aa		7.24	□□□□□ -1.25
ECHDC1-223	ENST00000534442	ZNF598	Q86UK7	904 aa	Known RBP	7.24	□□□□□ -1.25

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