RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZNF468Q5VIY5 522 aaPredicted RBP5.72□□□□□ -1.49
CSMD3-210ENST00000534172 GOLGA6L1Q8N7Z2 621 aa5.72□□□□□ -1.49
CSMD3-210ENST00000534172 ELP3Q9H9T3 547 aa5.72□□□□□ -1.49
CSMD3-210ENST00000534172 LRRC4BQ9NT99 713 aa5.72□□□□□ -1.49
CSMD3-210ENST00000534172 PSAPP07602 524 aa5.71□□□□□ -1.49
CSMD3-210ENST00000534172 ATP2B2Q01814 1243 aa5.71□□□□□ -1.49
CSMD3-210ENST00000534172 TMC7Q7Z402 723 aa5.71□□□□□ -1.49
CSMD3-210ENST00000534172 FRMD6Q96NE9 622 aa5.71□□□□□ -1.49
CSMD3-210ENST00000534172 ABI2Q9NYB9 513 aaPredicted RBP5.71□□□□□ -1.49
CSMD3-210ENST00000534172 TREHO43280 583 aa5.71□□□□□ -1.5
CSMD3-210ENST00000534172 WFS1O76024 890 aa5.71□□□□□ -1.5
CSMD3-210ENST00000534172 RARAP10276 462 aa5.71□□□□□ -1.5
CSMD3-210ENST00000534172 ADH6P28332 368 aa5.71□□□□□ -1.5
CSMD3-210ENST00000534172 KLRG1Q96E93 195 aa5.71□□□□□ -1.5
CSMD3-210ENST00000534172 COL25A1Q9BXS0 654 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-210ENST00000534172 ANKRD33BA6NCL7 494 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 DNAJC14Q6Y2X3 702 aaPredicted RBP5.7□□□□□ -1.5
CSMD3-210ENST00000534172 GGNBP2Q9H3C7 697 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 STRN4Q9NRL3 753 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 TLR7Q9NYK1 1049 aaKnown RBP5.7□□□□□ -1.5
CSMD3-210ENST00000534172 PHF20L1A8MW92 1017 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 GPR25O00155 361 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 PHACTR2O75167 634 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 CTBSQ01459 385 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 PLAURQ03405 335 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 ALG1LQ6GMV1 187 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 FBF1Q8TES7 1133 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 BHMTQ93088 406 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 RBSNQ9H1K0 784 aa5.7□□□□□ -1.5
CSMD3-210ENST00000534172 CPNE3O75131 537 aaKnown RBP5.69□□□□□ -1.5
CSMD3-210ENST00000534172 ALAS2P22557 587 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 VEGFBP49765 207 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 NRLP54845 237 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 FMR1Q06787 632 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSMD3-210ENST00000534172 HYAL2Q12891 473 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 DSC3Q14574 896 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 EAPPQ56P03 285 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-210ENST00000534172 ZNF326Q5BKZ1 582 aaKnown RBP5.69□□□□□ -1.5
CSMD3-210ENST00000534172 TREML4Q6UXN2 200 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 IGF1RP08069 1367 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 ADARB2-AS1A8MUL3 147 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 SASH3O75995 380 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 NFKB1P19838 968 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 GAS6Q14393 721 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 TRIP4Q15650 581 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-210ENST00000534172 GPR161Q8N6U8 529 aaKnown RBP5.69□□□□□ -1.5
CSMD3-210ENST00000534172 OR13H1Q8NG92 308 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 TNFRSF25Q93038 417 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 CSRNP1Q96S65 589 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 SLC30A3Q99726 388 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 ZFYVE28Q9HCC9 887 aa5.69□□□□□ -1.5
CSMD3-210ENST00000534172 GIPC1O14908 333 aa5.68□□□□□ -1.5
CSMD3-210ENST00000534172 TNFRSF21O75509 655 aa5.68□□□□□ -1.5
CSMD3-210ENST00000534172 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
CSMD3-210ENST00000534172 SYT9Q86SS6 491 aa5.68□□□□□ -1.5
CSMD3-210ENST00000534172 CACTIN-AS1Q8N1I8 211 aa5.68□□□□□ -1.5
CSMD3-210ENST00000534172 NIF3L1Q9GZT8 377 aa5.68□□□□□ -1.5
CSMD3-210ENST00000534172 SLCO4C1Q6ZQN7 724 aa5.68□□□□□ -1.5
CSMD3-210ENST00000534172 DHX32Q7L7V1 743 aaKnown RBP5.68□□□□□ -1.5
CSMD3-210ENST00000534172 EDN3P14138 238 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 CES1P23141 567 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 GPLD1P80108 840 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 TRPM4Q8TD43 1214 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 SPACA7Q96KW9 195 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 OXCT2Q9BYC2 517 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-210ENST00000534172 ENAMQ9NRM1 1142 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 USP20Q9Y2K6 914 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 E9PSI1 815 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 SLURP2P0DP57 97 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 ENOX2Q16206 610 aaKnown RBP5.67□□□□□ -1.5
CSMD3-210ENST00000534172 KANK3Q6NY19 840 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 UBE2OQ9C0C9 1292 aaKnown RBP5.67□□□□□ -1.5
CSMD3-210ENST00000534172 PPP4R2Q9NY27 417 aa5.67□□□□□ -1.5
CSMD3-210ENST00000534172 GPR182O15218 404 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 TARSP26639 723 aaKnown RBP5.66□□□□□ -1.5
CSMD3-210ENST00000534172 KRT25Q7Z3Z0 450 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 TMEM63CQ9P1W3 806 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 ERBB4Q15303 1308 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 ELOA3CA0A087WX78 387 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-210ENST00000534172 ELOA3DA6NLF2 546 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-210ENST00000534172 C2CD2LO14523 706 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 MMP20O60882 483 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 IGHA2P01877 340 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 ELOA3BQ3SY89 546 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 GALNT12Q8IXK2 581 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 ELOA3Q8NG57 546 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 CNTNAP3BQ96NU0 1288 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 CNTNAP3Q9BZ76 1288 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 ZFYVE1Q9HBF4 777 aa5.66□□□□□ -1.5
CSMD3-210ENST00000534172 EIF1AYO14602 144 aaKnown RBP5.65□□□□□ -1.5
CSMD3-210ENST00000534172 PRPF40AO75400 957 aaKnown RBP5.65□□□□□ -1.5
CSMD3-210ENST00000534172 KIF4AO95239 1232 aa5.65□□□□□ -1.5
CSMD3-210ENST00000534172 ADAMTS2O95450 1211 aa5.65□□□□□ -1.5
CSMD3-210ENST00000534172 GHRHP01286 108 aa5.65□□□□□ -1.5
CSMD3-210ENST00000534172 MAP3K10Q02779 954 aa5.65□□□□□ -1.5
CSMD3-210ENST00000534172 TTC9Q92623 222 aa5.65□□□□□ -1.5
CSMD3-210ENST00000534172 ZNF775Q96BV0 537 aaPredicted RBP5.65□□□□□ -1.5
CSMD3-210ENST00000534172 FRRS1LQ9P0K9 344 aa5.65□□□□□ -1.5
CSMD3-210ENST00000534172 PIK3R2O00459 728 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms