RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 NBPF4Q96M43 638 aa8.09□□□□□ -1.11
CMTM1-220ENST00000534143 PNNQ9H307 717 aaKnown RBP8.09□□□□□ -1.11
CMTM1-220ENST00000534143 FAM208AQ9UK61 1670 aaKnown RBP8.08□□□□□ -1.12
CMTM1-220ENST00000534143 AFF2P51816 1311 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 APAF1O14727 1248 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 VARSP26640 1264 aaKnown RBP8.08□□□□□ -1.12
CMTM1-220ENST00000534143 PRKAR2BP31323 418 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-220ENST00000534143 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 ZNF772Q68DY9 489 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-220ENST00000534143 TCP11L2Q8N4U5 519 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 ARMC2Q8NEN0 867 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 EP400Q96L91 3159 aa8.08□□□□□ -1.12
CMTM1-220ENST00000534143 COL5A2P05997 1499 aaPredicted RBP8.07□□□□□ -1.12
CMTM1-220ENST00000534143 ZBED9Q6R2W3 1325 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 ALDH1A1P00352 501 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 TMPOP42166 694 aaKnown RBP8.07□□□□□ -1.12
CMTM1-220ENST00000534143 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 PHACTR3Q96KR7 559 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 DLG5Q8TDM6 1919 aa8.07□□□□□ -1.12
CMTM1-220ENST00000534143 WDR17Q8IZU2 1322 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 ZNF521Q96K83 1311 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 RGS12O14924 1447 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 PLCH1Q4KWH8 1693 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 AXIN1O15169 862 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 ADAMTS2O95450 1211 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 MPNDQ8N594 471 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 USHBP1Q8N6Y0 703 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
CMTM1-220ENST00000534143 NRAPQ86VF7 1730 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
CMTM1-220ENST00000534143 SLIT2O94813 1529 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 RXRBP28702 533 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 NFE2L2Q16236 605 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 CCDC27Q2M243 656 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 LRRN4Q8WUT4 740 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 HPS1Q92902 700 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 CARD10Q9BWT7 1032 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 BTG4Q9NY30 223 aa8.05□□□□□ -1.12
CMTM1-220ENST00000534143 MAPK8IP3Q9UPT6 1336 aa8.04□□□□□ -1.12
CMTM1-220ENST00000534143 AP1G2O75843 785 aa8.04□□□□□ -1.12
CMTM1-220ENST00000534143 NEFMP07197 916 aa8.04□□□□□ -1.12
CMTM1-220ENST00000534143 CSB-PGBD3P0DP91 1061 aa8.04□□□□□ -1.12
CMTM1-220ENST00000534143 EVA1CP58658 441 aa8.04□□□□□ -1.12
CMTM1-220ENST00000534143 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
CMTM1-220ENST00000534143 NLRP2Q9NX02 1062 aa8.04□□□□□ -1.12
CMTM1-220ENST00000534143 RRP7AQ9Y3A4 280 aaKnown RBP8.04□□□□□ -1.12
CMTM1-220ENST00000534143 CRB1P82279 1406 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.03□□□□□ -1.12
CMTM1-220ENST00000534143 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 RFC5P40937 340 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 RIPK4P57078 832 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 MTHFSDQ2M296 383 aaKnown RBP8.03□□□□□ -1.12
CMTM1-220ENST00000534143 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 NBPF14Q5TI25 921 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 TOM1L2Q6ZVM7 507 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
CMTM1-220ENST00000534143 WWC1Q8IX03 1113 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 FNBP4Q8N3X1 1017 aaPredicted RBP8.03□□□□□ -1.12
CMTM1-220ENST00000534143 FAM174AQ8TBP5 190 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
CMTM1-220ENST00000534143 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 DACH1Q9UI36 760 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 TLL2Q9Y6L7 1015 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
CMTM1-220ENST00000534143 BCL9LQ86UU0 1499 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 BRWD3Q6RI45 1802 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 POTECB2RU33 542 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 AGERQ15109 404 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 PLEKHO1Q53GL0 409 aaPredicted RBP8.02□□□□□ -1.13
CMTM1-220ENST00000534143 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 WDR63Q8IWG1 891 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.13
CMTM1-220ENST00000534143 PKD1L3Q7Z443 1732 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 TATP17735 454 aaPredicted RBP8.01□□□□□ -1.13
CMTM1-220ENST00000534143 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 NR6A1Q15406 480 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 AMOTQ4VCS5 1084 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 SH3BP5LQ7L8J4 393 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 UNC5CLQ8IV45 518 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 TRMT2AQ8IZ69 625 aaKnown RBP8.01□□□□□ -1.13
CMTM1-220ENST00000534143 RAPGEF4Q8WZA2 1011 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 NGLY1Q96IV0 654 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 CDK15Q96Q40 435 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
CMTM1-220ENST00000534143 MEGF6O75095 1541 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 VIRMAQ69YN4 1812 aaKnown RBP8.01□□□□□ -1.13
CMTM1-220ENST00000534143 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
CMTM1-220ENST00000534143 PARP4Q9UKK3 1724 aaKnown RBP8□□□□□ -1.13
CMTM1-220ENST00000534143 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
CMTM1-220ENST00000534143 PRKCSHP14314 528 aaPredicted RBP8□□□□□ -1.13
CMTM1-220ENST00000534143 IL2RBP14784 551 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 RBM6P78332 1123 aaKnown RBP8□□□□□ -1.13
CMTM1-220ENST00000534143 LMOD3Q0VAK6 560 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms