RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RRP7BPQ9NSQ0 103 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 XIRP1Q702N8 1843 aaKnown RBP4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 EEA1Q15075 1411 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 MTUS2Q5JR59 1369 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 CDC42BPAQ5VT25 1732 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 ZC3H13Q5T200 1668 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 CCDC18Q5T9S5 1454 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 NEURL1BA8MQ27 555 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 C2CD2LO14523 706 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 STAU1O95793 577 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 TSGA10IPQ3SY00 556 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 ARSJQ5FYB0 599 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 PPARGC1BQ86YN6 1023 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 LRRC59Q96AG4 307 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 BTBD6Q96KE9 485 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 SUV39H2Q9H5I1 410 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 ETNK1Q9HBU6 452 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 NOP53Q9NZM5 478 aaKnown RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 HRH3Q9Y5N1 445 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 GJA3Q9Y6H8 435 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 PHLPP1O60346 1717 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 ATAD2Q6PL18 1390 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 ABCC3O15438 1527 aa4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 PRDM15P57071 1507 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-208ENST00000534106 CDK12Q9NYV4 1490 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 GNB5O14775 395 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 KHNYNO15037 678 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 SYNMO15061 1565 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 PPP1R15AO75807 674 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 COL8A1P27658 744 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 UBAP2LQ14157 1087 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 SLCO4C1Q6ZQN7 724 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 FGD6Q6ZV73 1430 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 ZCCHC2Q9C0B9 1178 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 CRISPLD1Q9H336 500 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 TRPC5Q9UL62 973 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 TBC1D2BQ9UPU7 963 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 AMOTL2Q9Y2J4 779 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 TBX22Q9Y458 520 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 PCDHGC4Q9Y5F7 938 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 TET3O43151 1660 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 SLIT1O75093 1534 aa4.76□□□□□ -1.65
CHMP4A-208ENST00000534106 COL16A1Q07092 1604 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 DCDC2BA2VCK2 349 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 C1QTNF9BB2RNN3 333 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 ATXN7O15265 892 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 YY1P25490 414 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 GDF10P55107 478 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 FNBP4Q8N3X1 1017 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 ORAI2Q96SN7 254 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 NIFKQ9BYG3 293 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 SERTAD1Q9UHV2 236 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 CHIC2Q9UKJ5 165 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 LRRC9Q6ZRR7 1453 aa4.75□□□□□ -1.65
CHMP4A-208ENST00000534106 GPR37L1O60883 481 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 INHAP05111 366 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 ARAFP10398 606 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 EPXP11678 715 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 TATP17735 454 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 VAC14Q08AM6 782 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 SEMA3FQ13275 785 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 NBPF1Q3BBV0 1214 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 LINC00114Q6XXX2 140 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 BICDL1Q6ZP65 573 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 CHSY3Q70JA7 882 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 NLRP8Q86W28 1048 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 C1orf216Q8TAB5 229 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 CABP1Q9NZU7 370 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 PRR12Q9ULL5 1215 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 PNPLA6Q8IY17 1366 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 CCDC141Q6ZP82 1450 aa4.74□□□□□ -1.65
CHMP4A-208ENST00000534106 A0A1W2PNR3 127 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 CD33P20138 364 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 ADH6P28332 368 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 SMTNP53814 917 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 BRPF1P55201 1214 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 XPCQ01831 940 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 R3HDM1Q15032 1099 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 FAM182BQ5T319 152 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 PHTF2Q8N3S3 785 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 CFAP65Q6ZU64 1925 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 MAST1Q9Y2H9 1570 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 ADGBQ8N7X0 1667 aa4.73□□□□□ -1.65
CHMP4A-208ENST00000534106 PTPRUQ92729 1446 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 SETD5Q9C0A6 1442 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 UBR1Q8IWV7 1749 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 MAPTP10636 758 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 ALAS2P22557 587 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 ABL2P42684 1182 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 DOC2BQ14184 412 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 MAP7D1Q3KQU3 841 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 KANK4Q5T7N3 995 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 CD163Q86VB7 1156 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 Q8N3U1 123 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 NEUROD4Q9HD90 331 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 CAMSAP2Q08AD1 1489 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 ATRNO75882 1429 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 ARHGAP31Q2M1Z3 1444 aa4.72□□□□□ -1.65
CHMP4A-208ENST00000534106 RIMS2Q9UQ26 1411 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms