RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PARP10Q53GL7 1025 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 MPHOSPH8Q99549 860 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 GREM2Q9H772 168 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
RTL1-201ENST00000534062 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 TBC1D9BQ66K14 1250 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 CNTNAP4Q9C0A0 1308 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
RTL1-201ENST00000534062 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.65□□□□□ -0.54
RTL1-201ENST00000534062 PAPPAQ13219 1627 aa11.65□□□□□ -0.55
RTL1-201ENST00000534062 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
RTL1-201ENST00000534062 PDE8AO60658 829 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 CTSWP56202 376 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
RTL1-201ENST00000534062 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 CDC45O75419 566 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 GSPT1P15170 499 aaKnown RBP11.64□□□□□ -0.55
RTL1-201ENST00000534062 SDSP20132 328 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 ZNF34Q8IZ26 560 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 PDCL3Q9H2J4 239 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 ERC2O15083 957 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 SASH1O94885 1247 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 CASP7P55210 303 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
RTL1-201ENST00000534062 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
RTL1-201ENST00000534062 PANK2Q9BZ23 570 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
RTL1-201ENST00000534062 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 KCNJ4P48050 445 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
RTL1-201ENST00000534062 EAF2Q96CJ1 260 aaPredicted RBP11.63□□□□□ -0.55
RTL1-201ENST00000534062 XRCC6P12956 609 aaKnown RBP eCLIP11.63□□□□□ -0.55
RTL1-201ENST00000534062 TIMM10P62072 90 aa11.63□□□□□ -0.55
RTL1-201ENST00000534062 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
RTL1-201ENST00000534062 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
RTL1-201ENST00000534062 COPRSQ9NQ92 184 aa11.63□□□□□ -0.55
RTL1-201ENST00000534062 THSD7AQ9UPZ6 1657 aa11.63□□□□□ -0.55
RTL1-201ENST00000534062 HSP90B1P14625 803 aaKnown RBP11.63□□□□□ -0.55
RTL1-201ENST00000534062 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
RTL1-201ENST00000534062 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
RTL1-201ENST00000534062 BTAF1O14981 1849 aa11.63□□□□□ -0.55
RTL1-201ENST00000534062 EYA2O00167 538 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 RABL6Q3YEC7 729 aaPredicted RBP11.62□□□□□ -0.55
RTL1-201ENST00000534062 L1TD1Q5T7N2 865 aaKnown RBP11.62□□□□□ -0.55
RTL1-201ENST00000534062 TPTE2Q6XPS3 522 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 SLC27A3Q5K4L6 730 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 ECHDC1Q9NTX5 307 aa11.62□□□□□ -0.55
RTL1-201ENST00000534062 MYH14Q7Z406 1995 aaKnown RBP11.62□□□□□ -0.55
RTL1-201ENST00000534062 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
RTL1-201ENST00000534062 IL15P40933 162 aaPredicted RBP11.62□□□□□ -0.55
RTL1-201ENST00000534062 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
RTL1-201ENST00000534062 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
RTL1-201ENST00000534062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.61□□□□□ -0.55
RTL1-201ENST00000534062 NDUFB9Q9Y6M9 179 aa11.61□□□□□ -0.55
RTL1-201ENST00000534062 CNTROBQ8N137 903 aa11.61□□□□□ -0.55
RTL1-201ENST00000534062 DBNDD2Q9BQY9 259 aa11.61□□□□□ -0.55
RTL1-201ENST00000534062 GLRX3O76003 335 aaKnown RBP11.6□□□□□ -0.55
RTL1-201ENST00000534062 RFX5P48382 616 aaPredicted RBP11.6□□□□□ -0.55
RTL1-201ENST00000534062 TNNI3KQ59H18 835 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 NLRP3Q96P20 1036 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 FPGT-TNNI3KV9GXZ4 949 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 FSD1Q9BTV5 496 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 DIAPH3Q9NSV4 1193 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 TJP1Q07157 1748 aa11.6□□□□□ -0.55
RTL1-201ENST00000534062 NTSR2O95665 410 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 ANO2Q9NQ90 1003 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 CDHR2Q9BYE9 1310 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 TAF5LO75529 589 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 EZH2Q15910 746 aaKnown RBP11.59□□□□□ -0.55
RTL1-201ENST00000534062 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 SNRKQ9NRH2 765 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 A0A1B0GUL7 405 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
RTL1-201ENST00000534062 NFIXQ14938 502 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 PROM2Q8N271 834 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
RTL1-201ENST00000534062 USP42Q9H9J4 1324 aaKnown RBP11.58□□□□□ -0.56
RTL1-201ENST00000534062 TTC39AQ5SRH9 613 aa11.58□□□□□ -0.56
RTL1-201ENST00000534062 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
RTL1-201ENST00000534062 CWC27Q6UX04 472 aaKnown RBP11.58□□□□□ -0.56
RTL1-201ENST00000534062 EDC3Q96F86 508 aaKnown RBP11.58□□□□□ -0.56
RTL1-201ENST00000534062 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
RTL1-201ENST00000534062 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
RTL1-201ENST00000534062 CCDC158Q5M9N0 1113 aa11.58□□□□□ -0.56
RTL1-201ENST00000534062 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
RTL1-201ENST00000534062 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
RTL1-201ENST00000534062 SNAP23O00161 211 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 BAG6P46379 1132 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms