RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 MPNDQ8N594 471 aa12.24□□□□□ -0.45
PACS1-214ENST00000533811 ZIC5Q96T25 663 aa12.24□□□□□ -0.45
PACS1-214ENST00000533811 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
PACS1-214ENST00000533811 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
PACS1-214ENST00000533811 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
PACS1-214ENST00000533811 NOGQ13253 232 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 TNIP1Q15025 636 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 PARP10Q53GL7 1025 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 VPS33BQ9H267 617 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
PACS1-214ENST00000533811 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
PACS1-214ENST00000533811 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
PACS1-214ENST00000533811 AKAP11Q9UKA4 1901 aa12.22□□□□□ -0.45
PACS1-214ENST00000533811 H7C1D1 291 aa12.22□□□□□ -0.45
PACS1-214ENST00000533811 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
PACS1-214ENST00000533811 EIF2S2P20042 333 aaKnown RBP12.22□□□□□ -0.45
PACS1-214ENST00000533811 KIAA2012Q0VF49 1180 aa12.22□□□□□ -0.45
PACS1-214ENST00000533811 DLK2Q6UY11 383 aa12.22□□□□□ -0.45
PACS1-214ENST00000533811 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
PACS1-214ENST00000533811 ANXA1P04083 346 aa12.21□□□□□ -0.45
PACS1-214ENST00000533811 SOX10P56693 466 aa12.21□□□□□ -0.45
PACS1-214ENST00000533811 DDX46Q7L014 1031 aaKnown RBP12.21□□□□□ -0.45
PACS1-214ENST00000533811 SP8Q8IXZ3 490 aa12.21□□□□□ -0.45
PACS1-214ENST00000533811 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
PACS1-214ENST00000533811 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
PACS1-214ENST00000533811 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.45
PACS1-214ENST00000533811 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
PACS1-214ENST00000533811 PGAP2Q9UHJ9 254 aa12.21□□□□□ -0.45
PACS1-214ENST00000533811 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
PACS1-214ENST00000533811 BBOX1O75936 387 aa12.2□□□□□ -0.46
PACS1-214ENST00000533811 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
PACS1-214ENST00000533811 RBM26Q5T8P6 1007 aaKnown RBP12.2□□□□□ -0.46
PACS1-214ENST00000533811 SAMD7Q7Z3H4 446 aa12.2□□□□□ -0.46
PACS1-214ENST00000533811 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
PACS1-214ENST00000533811 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
PACS1-214ENST00000533811 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
PACS1-214ENST00000533811 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
PACS1-214ENST00000533811 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
PACS1-214ENST00000533811 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
PACS1-214ENST00000533811 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
PACS1-214ENST00000533811 RGMBQ6NW40 437 aa12.19□□□□□ -0.46
PACS1-214ENST00000533811 C2orf69Q8N8R5 385 aa12.19□□□□□ -0.46
PACS1-214ENST00000533811 DBNDD1Q9H9R9 158 aa12.19□□□□□ -0.46
PACS1-214ENST00000533811 GBA2Q9HCG7 927 aaPredicted RBP12.19□□□□□ -0.46
PACS1-214ENST00000533811 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
PACS1-214ENST00000533811 MAPK8IP3Q9UPT6 1336 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 PSMD14O00487 310 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 TRPA1O75762 1119 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 ZNF157P51786 506 aaPredicted RBP12.18□□□□□ -0.46
PACS1-214ENST00000533811 KIF23Q02241 960 aaPredicted RBP12.18□□□□□ -0.46
PACS1-214ENST00000533811 GRAPQ13588 217 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
PACS1-214ENST00000533811 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
PACS1-214ENST00000533811 HSP90AB3PQ58FF7 597 aa12.17□□□□□ -0.46
PACS1-214ENST00000533811 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
PACS1-214ENST00000533811 DCPSQ96C86 337 aaKnown RBP12.17□□□□□ -0.46
PACS1-214ENST00000533811 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 FAM155AB1AL88 458 aaPredicted RBP12.16□□□□□ -0.46
PACS1-214ENST00000533811 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 EGFRP00533 1210 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 DPF2Q92785 391 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 CCDC102AQ96A19 550 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
PACS1-214ENST00000533811 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
PACS1-214ENST00000533811 DDX60Q8IY21 1712 aaKnown RBP12.16□□□□□ -0.46
PACS1-214ENST00000533811 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
PACS1-214ENST00000533811 PDIA6Q15084 440 aa12.15□□□□□ -0.46
PACS1-214ENST00000533811 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
PACS1-214ENST00000533811 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
PACS1-214ENST00000533811 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
PACS1-214ENST00000533811 SAGE1Q9NXZ1 904 aa12.15□□□□□ -0.46
PACS1-214ENST00000533811 ECE2O60344 883 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 KIF4BQ2VIQ3 1234 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 TMC4Q7Z404 712 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
PACS1-214ENST00000533811 SCN9AQ15858 1988 aa12.13□□□□□ -0.47
PACS1-214ENST00000533811 G3V3G9 751 aa12.13□□□□□ -0.47
PACS1-214ENST00000533811 SLC10A3P09131 477 aa12.13□□□□□ -0.47
PACS1-214ENST00000533811 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
PACS1-214ENST00000533811 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
PACS1-214ENST00000533811 CTU1Q7Z7A3 348 aaKnown RBP12.13□□□□□ -0.47
PACS1-214ENST00000533811 CELF1Q92879 486 aaKnown RBP12.13□□□□□ -0.47
PACS1-214ENST00000533811 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
PACS1-214ENST00000533811 ASTN2O75129 1339 aaPredicted RBP12.12□□□□□ -0.47
PACS1-214ENST00000533811 GPSM2P81274 684 aa12.12□□□□□ -0.47
PACS1-214ENST00000533811 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
PACS1-214ENST00000533811 CSRNP1Q96S65 589 aa12.12□□□□□ -0.47
PACS1-214ENST00000533811 EYA3Q99504 573 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms