RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 CHRNA5P30532 468 aa27.39■■□□□ 1.98
VPS51-212ENST00000533656 SF3B3Q15393 1217 aaKnown RBP27.39■■□□□ 1.98
VPS51-212ENST00000533656 GPBP1L1Q9HC44 474 aaPredicted RBP27.39■■□□□ 1.98
VPS51-212ENST00000533656 C2CD5Q86YS7 1000 aa27.38■■□□□ 1.97
VPS51-212ENST00000533656 JARID2Q92833 1246 aaPredicted RBP27.38■■□□□ 1.97
VPS51-212ENST00000533656 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
VPS51-212ENST00000533656 DDX60Q8IY21 1712 aaKnown RBP27.38■■□□□ 1.97
VPS51-212ENST00000533656 ANKRD31Q8N7Z5 1873 aa27.38■■□□□ 1.97
VPS51-212ENST00000533656 SRGNP10124 158 aa27.37■■□□□ 1.97
VPS51-212ENST00000533656 CTSWP56202 376 aa27.37■■□□□ 1.97
VPS51-212ENST00000533656 CCDC152Q4G0S7 254 aa27.37■■□□□ 1.97
VPS51-212ENST00000533656 RPGRQ92834 1020 aaKnown RBP27.37■■□□□ 1.97
VPS51-212ENST00000533656 MASTLQ96GX5 879 aa27.37■■□□□ 1.97
VPS51-212ENST00000533656 MEIS3Q99687 375 aa27.37■■□□□ 1.97
VPS51-212ENST00000533656 TNRC6CQ9HCJ0 1690 aaKnown RBP27.36■■□□□ 1.97
VPS51-212ENST00000533656 SBF1O95248 1867 aa27.36■■□□□ 1.97
VPS51-212ENST00000533656 NPR1P16066 1061 aa27.36■■□□□ 1.97
VPS51-212ENST00000533656 C20orf194Q5TEA3 1177 aa27.36■■□□□ 1.97
VPS51-212ENST00000533656 STYK1Q6J9G0 422 aa27.36■■□□□ 1.97
VPS51-212ENST00000533656 ARHGAP27Q6ZUM4 889 aa27.35■■□□□ 1.97
VPS51-212ENST00000533656 SUCLG2Q96I99 432 aa27.35■■□□□ 1.97
VPS51-212ENST00000533656 COG6Q9Y2V7 657 aa27.35■■□□□ 1.97
VPS51-212ENST00000533656 RTL9Q8NET4 1388 aa27.35■■□□□ 1.97
VPS51-212ENST00000533656 ZBTB7BO15156 539 aaPredicted RBP27.34■■□□□ 1.97
VPS51-212ENST00000533656 HOXA10P31260 410 aaPredicted RBP27.34■■□□□ 1.97
VPS51-212ENST00000533656 RBM17Q96I25 401 aaKnown RBP27.34■■□□□ 1.97
VPS51-212ENST00000533656 CSF1RP07333 972 aa27.33■■□□□ 1.97
VPS51-212ENST00000533656 C3orf67Q6ZVT6 689 aa27.33■■□□□ 1.97
VPS51-212ENST00000533656 PIM2Q9P1W9 311 aa27.33■■□□□ 1.97
VPS51-212ENST00000533656 COL11A2P13942 1736 aaPredicted RBP27.33■■□□□ 1.96
VPS51-212ENST00000533656 GNAI2P04899 355 aa27.32■■□□□ 1.96
VPS51-212ENST00000533656 ALDH1B1P30837 517 aa27.32■■□□□ 1.96
VPS51-212ENST00000533656 FOXO4P98177 505 aa27.32■■□□□ 1.96
VPS51-212ENST00000533656 DDX46Q7L014 1031 aaKnown RBP27.32■■□□□ 1.96
VPS51-212ENST00000533656 TTLL11Q8NHH1 800 aa27.32■■□□□ 1.96
VPS51-212ENST00000533656 CNKSR1Q969H4 720 aa27.32■■□□□ 1.96
VPS51-212ENST00000533656 RABL6Q3YEC7 729 aaPredicted RBP27.31■■□□□ 1.96
VPS51-212ENST00000533656 CRAMP1Q96RY5 1269 aa27.31■■□□□ 1.96
VPS51-212ENST00000533656 DALRD3Q5D0E6 543 aaKnown RBP27.3■■□□□ 1.96
VPS51-212ENST00000533656 KAZALD1Q96I82 304 aa27.3■■□□□ 1.96
VPS51-212ENST00000533656 BICC1Q9H694 974 aaKnown RBP27.3■■□□□ 1.96
VPS51-212ENST00000533656 ZNF622Q969S3 477 aaKnown RBP eCLIP27.29■■□□□ 1.96
VPS51-212ENST00000533656 LRRFIP2Q9Y608 721 aaKnown RBP27.29■■□□□ 1.96
VPS51-212ENST00000533656 KIF3CO14782 793 aa27.28■■□□□ 1.96
VPS51-212ENST00000533656 EPHA10Q5JZY3 1008 aa27.28■■□□□ 1.96
VPS51-212ENST00000533656 LMBR1LQ6UX01 489 aa27.28■■□□□ 1.96
VPS51-212ENST00000533656 TTLL6Q8N841 843 aa27.28■■□□□ 1.96
VPS51-212ENST00000533656 GRAPQ13588 217 aa27.27■■□□□ 1.96
VPS51-212ENST00000533656 GRAPLQ8TC17 118 aaPredicted RBP27.27■■□□□ 1.96
VPS51-212ENST00000533656 CDC5LQ99459 802 aaKnown RBP27.27■■□□□ 1.96
VPS51-212ENST00000533656 MYH3P11055 1940 aa27.27■■□□□ 1.96
VPS51-212ENST00000533656 CACNA1SQ13698 1873 aa27.27■■□□□ 1.96
VPS51-212ENST00000533656 CCDC88AQ3V6T2 1871 aa27.27■■□□□ 1.96
VPS51-212ENST00000533656 AAMPQ13685 434 aa27.26■■□□□ 1.95
VPS51-212ENST00000533656 TMC4Q7Z404 712 aa27.26■■□□□ 1.95
VPS51-212ENST00000533656 ANKRD44Q8N8A2 993 aa27.26■■□□□ 1.95
VPS51-212ENST00000533656 GREM2Q9H772 168 aa27.26■■□□□ 1.95
VPS51-212ENST00000533656 ZBTB40Q9NUA8 1239 aa27.26■■□□□ 1.95
VPS51-212ENST00000533656 IFIT5Q13325 482 aaKnown RBP27.25■■□□□ 1.95
VPS51-212ENST00000533656 MTX1Q13505 466 aa27.25■■□□□ 1.95
VPS51-212ENST00000533656 C9orf131Q5VYM1 1079 aa27.25■■□□□ 1.95
VPS51-212ENST00000533656 CHMP3Q9Y3E7 222 aa27.25■■□□□ 1.95
VPS51-212ENST00000533656 ANKRD18BA2A2Z9 1011 aa27.24■■□□□ 1.95
VPS51-212ENST00000533656 BBOX1O75936 387 aa27.24■■□□□ 1.95
VPS51-212ENST00000533656 ITGA6P23229 1130 aa27.24■■□□□ 1.95
VPS51-212ENST00000533656 CCDC57Q2TAC2 916 aa27.24■■□□□ 1.95
VPS51-212ENST00000533656 FAM161AQ3B820 660 aa27.24■■□□□ 1.95
VPS51-212ENST00000533656 PRPF40BQ6NWY9 871 aaKnown RBP27.22■■□□□ 1.95
VPS51-212ENST00000533656 CCDC85AQ96PX6 553 aaPredicted RBP27.22■■□□□ 1.95
VPS51-212ENST00000533656 CRBNQ96SW2 442 aa27.22■■□□□ 1.95
VPS51-212ENST00000533656 TIAM2Q8IVF5 1701 aa27.21■■□□□ 1.95
VPS51-212ENST00000533656 RPS8P62241 208 aaKnown RBP27.21■■□□□ 1.95
VPS51-212ENST00000533656 RASSF7Q02833 373 aa27.21■■□□□ 1.95
VPS51-212ENST00000533656 ANKRD18AQ8IVF6 992 aa27.21■■□□□ 1.95
VPS51-212ENST00000533656 PPEF1O14829 653 aaPredicted RBP27.2■■□□□ 1.94
VPS51-212ENST00000533656 IGHMBP2P38935 993 aaKnown RBP27.2■■□□□ 1.94
VPS51-212ENST00000533656 SOGA3Q5TF21 947 aa27.2■■□□□ 1.94
VPS51-212ENST00000533656 NMRK2Q9NPI5 230 aa27.2■■□□□ 1.94
VPS51-212ENST00000533656 SEC31BQ9NQW1 1179 aa27.2■■□□□ 1.94
VPS51-212ENST00000533656 TAF7LQ5H9L4 462 aa27.19■■□□□ 1.94
VPS51-212ENST00000533656 CC2D2BQ6DHV5 1058 aa27.19■■□□□ 1.94
VPS51-212ENST00000533656 CELF1Q92879 486 aaKnown RBP27.19■■□□□ 1.94
VPS51-212ENST00000533656 TMX4Q9H1E5 349 aaPredicted RBP27.19■■□□□ 1.94
VPS51-212ENST00000533656 GRIPAP1Q4V328 841 aa27.18■■□□□ 1.94
VPS51-212ENST00000533656 RNF181Q9P0P0 153 aa27.18■■□□□ 1.94
VPS51-212ENST00000533656 RPAP2Q8IXW5 612 aaPredicted RBP27.17■■□□□ 1.94
VPS51-212ENST00000533656 C1orf115Q9H7X2 142 aa27.17■■□□□ 1.94
VPS51-212ENST00000533656 SRGAP3O43295 1099 aa27.16■■□□□ 1.94
VPS51-212ENST00000533656 PRELPP51888 382 aa27.16■■□□□ 1.94
VPS51-212ENST00000533656 ATP8B2P98198 1209 aa27.16■■□□□ 1.94
VPS51-212ENST00000533656 CEP85Q6P2H3 762 aa27.16■■□□□ 1.94
VPS51-212ENST00000533656 MPHOSPH8Q99549 860 aa27.16■■□□□ 1.94
VPS51-212ENST00000533656 BSDC1Q9NW68 430 aaPredicted RBP27.16■■□□□ 1.94
VPS51-212ENST00000533656 ATP6V0A2Q9Y487 856 aa27.16■■□□□ 1.94
VPS51-212ENST00000533656 FER1L6Q2WGJ9 1857 aa27.15■■□□□ 1.94
VPS51-212ENST00000533656 SP8Q8IXZ3 490 aa27.15■■□□□ 1.94
VPS51-212ENST00000533656 C7orf43Q8WVR3 580 aa27.15■■□□□ 1.94
VPS51-212ENST00000533656 FBXO3Q9UK99 471 aa27.15■■□□□ 1.94
VPS51-212ENST00000533656 SLX4Q8IY92 1834 aa27.14■■□□□ 1.94
VPS51-212ENST00000533656 HSPA6P17066 643 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms