RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 GNAI2P04899 355 aa16.8■□□□□ 0.28
TRAPPC4-214ENST00000533632 HCLS1P14317 486 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC4-214ENST00000533632 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
TRAPPC4-214ENST00000533632 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
TRAPPC4-214ENST00000533632 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
TRAPPC4-214ENST00000533632 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 ST5P78524 1137 aa16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 FOXO4P98177 505 aa16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 C3orf67Q6ZVT6 689 aa16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 ARFGEF1Q9Y6D6 1849 aa16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 SLC10A5Q5PT55 438 aa16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 SIRT2Q8IXJ6 389 aa16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
TRAPPC4-214ENST00000533632 COL4A1P02462 1669 aa16.78■□□□□ 0.28
TRAPPC4-214ENST00000533632 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
TRAPPC4-214ENST00000533632 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
TRAPPC4-214ENST00000533632 TAF1P21675 1872 aa16.78■□□□□ 0.28
TRAPPC4-214ENST00000533632 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC4-214ENST00000533632 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC4-214ENST00000533632 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.28
TRAPPC4-214ENST00000533632 SLX4Q8IY92 1834 aa16.77■□□□□ 0.28
TRAPPC4-214ENST00000533632 PNMA6EA0A0J9YXQ4 647 aa16.77■□□□□ 0.27
TRAPPC4-214ENST00000533632 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.27
TRAPPC4-214ENST00000533632 CRY2Q49AN0 593 aa16.77■□□□□ 0.27
TRAPPC4-214ENST00000533632 C2CD5Q86YS7 1000 aa16.77■□□□□ 0.27
TRAPPC4-214ENST00000533632 NPHP1O15259 732 aa16.76■□□□□ 0.27
TRAPPC4-214ENST00000533632 SRGNP10124 158 aa16.76■□□□□ 0.27
TRAPPC4-214ENST00000533632 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC4-214ENST00000533632 PDE6BP35913 854 aa16.76■□□□□ 0.27
TRAPPC4-214ENST00000533632 PDE8AO60658 829 aa16.75■□□□□ 0.27
TRAPPC4-214ENST00000533632 CTSWP56202 376 aa16.75■□□□□ 0.27
TRAPPC4-214ENST00000533632 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
TRAPPC4-214ENST00000533632 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC4-214ENST00000533632 MTX1Q13505 466 aa16.74■□□□□ 0.27
TRAPPC4-214ENST00000533632 TTLL11Q8NHH1 800 aa16.74■□□□□ 0.27
TRAPPC4-214ENST00000533632 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
TRAPPC4-214ENST00000533632 H0YIN7 160 aa16.74■□□□□ 0.27
TRAPPC4-214ENST00000533632 CSF1RP07333 972 aa16.74■□□□□ 0.27
TRAPPC4-214ENST00000533632 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
TRAPPC4-214ENST00000533632 SPEF2Q9C093 1822 aa16.73■□□□□ 0.27
TRAPPC4-214ENST00000533632 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
TRAPPC4-214ENST00000533632 GREM2Q9H772 168 aa16.73■□□□□ 0.27
TRAPPC4-214ENST00000533632 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 IGHDP01880 384 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 POLA2Q14181 598 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 RPAP2Q8IXW5 612 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 PDZRN3Q9UPQ7 1066 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 HDAC5Q9UQL6 1122 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 SSH3Q8TE77 659 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 MASTLQ96GX5 879 aa16.72■□□□□ 0.27
TRAPPC4-214ENST00000533632 HOXA10P31260 410 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-214ENST00000533632 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
TRAPPC4-214ENST00000533632 STYK1Q6J9G0 422 aa16.71■□□□□ 0.27
TRAPPC4-214ENST00000533632 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
TRAPPC4-214ENST00000533632 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
TRAPPC4-214ENST00000533632 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
TRAPPC4-214ENST00000533632 NPR1P16066 1061 aa16.7■□□□□ 0.26
TRAPPC4-214ENST00000533632 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRAPPC4-214ENST00000533632 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
TRAPPC4-214ENST00000533632 FER1L6Q2WGJ9 1857 aa16.7■□□□□ 0.26
TRAPPC4-214ENST00000533632 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 BCS1LQ9Y276 419 aa16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 RTL9Q8NET4 1388 aa16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 HSP90B1P14625 803 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 ITGA6P23229 1130 aa16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC4-214ENST00000533632 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-214ENST00000533632 GPR162Q16538 588 aa16.68■□□□□ 0.26
TRAPPC4-214ENST00000533632 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
TRAPPC4-214ENST00000533632 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-214ENST00000533632 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
TRAPPC4-214ENST00000533632 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC4-214ENST00000533632 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
TRAPPC4-214ENST00000533632 SBF1O95248 1867 aa16.67■□□□□ 0.26
TRAPPC4-214ENST00000533632 CHD4Q14839 1912 aa16.67■□□□□ 0.26
TRAPPC4-214ENST00000533632 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
TRAPPC4-214ENST00000533632 CNKSR1Q969H4 720 aa16.66■□□□□ 0.26
TRAPPC4-214ENST00000533632 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
TRAPPC4-214ENST00000533632 A0A1B0GUL6 1792 aa16.66■□□□□ 0.26
TRAPPC4-214ENST00000533632 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-214ENST00000533632 RPGRQ92834 1020 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-214ENST00000533632 CELF1Q92879 486 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-214ENST00000533632 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
TRAPPC4-214ENST00000533632 HMMRO75330 724 aa16.65■□□□□ 0.26
TRAPPC4-214ENST00000533632 CCDC57Q2TAC2 916 aa16.65■□□□□ 0.26
TRAPPC4-214ENST00000533632 OLFM4Q6UX06 510 aa16.65■□□□□ 0.26
TRAPPC4-214ENST00000533632 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
TRAPPC4-214ENST00000533632 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
TRAPPC4-214ENST00000533632 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 ALDH1B1P30837 517 aa16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 RBM17Q96I25 401 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 SIL1Q9H173 461 aa16.64■□□□□ 0.25
TRAPPC4-214ENST00000533632 DCTPP1Q9H773 170 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms