RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 GABBR2O75899 941 aa11.97□□□□□ -0.49
ZNF250-209ENST00000533543 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
ZNF250-209ENST00000533543 FAM89AQ96GI7 184 aa11.97□□□□□ -0.49
ZNF250-209ENST00000533543 MYD88Q99836 296 aa11.97□□□□□ -0.49
ZNF250-209ENST00000533543 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
ZNF250-209ENST00000533543 ABCC4O15439 1325 aa11.96□□□□□ -0.49
ZNF250-209ENST00000533543 GLTPD2A6NH11 291 aa11.96□□□□□ -0.49
ZNF250-209ENST00000533543 DDX58O95786 925 aaKnown RBP11.96□□□□□ -0.49
ZNF250-209ENST00000533543 EXOSC9Q06265 439 aaKnown RBP11.96□□□□□ -0.49
ZNF250-209ENST00000533543 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
ZNF250-209ENST00000533543 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
ZNF250-209ENST00000533543 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
ZNF250-209ENST00000533543 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
ZNF250-209ENST00000533543 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
ZNF250-209ENST00000533543 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
ZNF250-209ENST00000533543 CC2D2BQ6DHV5 1058 aa11.95□□□□□ -0.5
ZNF250-209ENST00000533543 G2E3Q7L622 706 aa11.95□□□□□ -0.5
ZNF250-209ENST00000533543 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
ZNF250-209ENST00000533543 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
ZNF250-209ENST00000533543 PI4KAP2A4QPH2 592 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
ZNF250-209ENST00000533543 VAMP4O75379 141 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 TOMM70O94826 608 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
ZNF250-209ENST00000533543 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 KSR2Q6VAB6 950 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 DDX46Q7L014 1031 aaKnown RBP11.94□□□□□ -0.5
ZNF250-209ENST00000533543 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
ZNF250-209ENST00000533543 PI4KAP1Q8N8J0 262 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 PSMD1Q99460 953 aa11.94□□□□□ -0.5
ZNF250-209ENST00000533543 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
ZNF250-209ENST00000533543 GRAPQ13588 217 aa11.93□□□□□ -0.5
ZNF250-209ENST00000533543 ZBTB38Q8NAP3 1195 aaPredicted RBP11.93□□□□□ -0.5
ZNF250-209ENST00000533543 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
ZNF250-209ENST00000533543 GRAPLQ8TC17 118 aaPredicted RBP11.93□□□□□ -0.5
ZNF250-209ENST00000533543 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
ZNF250-209ENST00000533543 MYH16Q9H6N6 1097 aa11.93□□□□□ -0.5
ZNF250-209ENST00000533543 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
ZNF250-209ENST00000533543 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
ZNF250-209ENST00000533543 ZNF521Q96K83 1311 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
ZNF250-209ENST00000533543 POTECB2RU33 542 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 BBOX1O75936 387 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
ZNF250-209ENST00000533543 HSPA6P17066 643 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 FLIIQ13045 1269 aa11.92□□□□□ -0.5
ZNF250-209ENST00000533543 SF3B3Q15393 1217 aaKnown RBP11.92□□□□□ -0.5
ZNF250-209ENST00000533543 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
ZNF250-209ENST00000533543 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
ZNF250-209ENST00000533543 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
ZNF250-209ENST00000533543 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
ZNF250-209ENST00000533543 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
ZNF250-209ENST00000533543 CELF1Q92879 486 aaKnown RBP11.91□□□□□ -0.5
ZNF250-209ENST00000533543 LAMB2P55268 1798 aa11.91□□□□□ -0.5
ZNF250-209ENST00000533543 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
ZNF250-209ENST00000533543 CCER2I3L3R5 266 aa11.9□□□□□ -0.5
ZNF250-209ENST00000533543 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
ZNF250-209ENST00000533543 FKBP5Q13451 457 aaPredicted RBP11.9□□□□□ -0.5
ZNF250-209ENST00000533543 CWF19L2Q2TBE0 894 aaKnown RBP11.9□□□□□ -0.5
ZNF250-209ENST00000533543 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
ZNF250-209ENST00000533543 JDP2Q8WYK2 163 aa11.9□□□□□ -0.5
ZNF250-209ENST00000533543 COL4A5P29400 1685 aa11.9□□□□□ -0.5
ZNF250-209ENST00000533543 CEP350Q5VT06 3117 aa11.9□□□□□ -0.5
ZNF250-209ENST00000533543 NEURL1BA8MQ27 555 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 FZD9O00144 591 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
ZNF250-209ENST00000533543 AOC3Q16853 763 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
ZNF250-209ENST00000533543 MPNDQ8N594 471 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
ZNF250-209ENST00000533543 SEC31BQ9NQW1 1179 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
ZNF250-209ENST00000533543 COL4A1P02462 1669 aa11.88□□□□□ -0.51
ZNF250-209ENST00000533543 PDE8AO60658 829 aa11.88□□□□□ -0.51
ZNF250-209ENST00000533543 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
ZNF250-209ENST00000533543 FSTL1Q12841 308 aa11.88□□□□□ -0.51
ZNF250-209ENST00000533543 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
ZNF250-209ENST00000533543 SMC1BQ8NDV3 1235 aa11.88□□□□□ -0.51
ZNF250-209ENST00000533543 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
ZNF250-209ENST00000533543 RTFDC1Q9BY42 306 aaPredicted RBP11.88□□□□□ -0.51
ZNF250-209ENST00000533543 CDHR2Q9BYE9 1310 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 TAF1P21675 1872 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 E9PSI1 815 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 F6X3S4 739 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 EIF6P56537 245 aaKnown RBP11.87□□□□□ -0.51
ZNF250-209ENST00000533543 RPS8P62241 208 aaKnown RBP11.87□□□□□ -0.51
ZNF250-209ENST00000533543 CCDC152Q4G0S7 254 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 NIM1KQ8IY84 436 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
ZNF250-209ENST00000533543 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
ZNF250-209ENST00000533543 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
ZNF250-209ENST00000533543 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
ZNF250-209ENST00000533543 CTSWP56202 376 aa11.86□□□□□ -0.51
ZNF250-209ENST00000533543 GPSM2P81274 684 aa11.86□□□□□ -0.51
ZNF250-209ENST00000533543 GCKRQ14397 625 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms