RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
COPB1-210ENST00000533533 TAF1P21675 1872 aa11.36□□□□□ -0.59
COPB1-210ENST00000533533 ABCC4O15439 1325 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 PDE4DIPQ5VU43 2346 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 TRAF5O00463 557 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
COPB1-210ENST00000533533 ECE1P42892 770 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 PROSER3Q2NL68 480 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 CST9Q5W186 159 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
COPB1-210ENST00000533533 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
COPB1-210ENST00000533533 ADARB2Q9NS39 739 aaKnown RBP11.35□□□□□ -0.59
COPB1-210ENST00000533533 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 ZNRF3Q9ULT6 936 aa11.35□□□□□ -0.59
COPB1-210ENST00000533533 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
COPB1-210ENST00000533533 CASP8AP2Q9UKL3 1982 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 BBOX1O75936 387 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 ANXA1P04083 346 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 CXCL9Q07325 125 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 LMOD3Q0VAK6 560 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 CYP4F22Q6NT55 531 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 GPR101Q96P66 508 aaPredicted RBP11.34□□□□□ -0.59
COPB1-210ENST00000533533 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 BABAM1Q9NWV8 329 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
COPB1-210ENST00000533533 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
COPB1-210ENST00000533533 GRM1Q13255 1194 aa11.33□□□□□ -0.6
COPB1-210ENST00000533533 HSP90AB3PQ58FF7 597 aa11.33□□□□□ -0.6
COPB1-210ENST00000533533 DPP8Q6V1X1 898 aaPredicted RBP11.33□□□□□ -0.6
COPB1-210ENST00000533533 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
COPB1-210ENST00000533533 SP8Q8IXZ3 490 aa11.33□□□□□ -0.6
COPB1-210ENST00000533533 MPNDQ8N594 471 aa11.33□□□□□ -0.6
COPB1-210ENST00000533533 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
COPB1-210ENST00000533533 APAF1O14727 1248 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 MAP2K2P36507 400 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
COPB1-210ENST00000533533 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
COPB1-210ENST00000533533 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
COPB1-210ENST00000533533 CIAPIN1Q6FI81 312 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
COPB1-210ENST00000533533 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 PGAP2Q9UHJ9 254 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
COPB1-210ENST00000533533 CDHR2Q9BYE9 1310 aa11.32□□□□□ -0.6
COPB1-210ENST00000533533 RAD17O75943 681 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 CELF2O95319 508 aaKnown RBP11.31□□□□□ -0.6
COPB1-210ENST00000533533 TCIRG1Q13488 830 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 GRAPQ13588 217 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 TNIP1Q15025 636 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
COPB1-210ENST00000533533 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
COPB1-210ENST00000533533 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 GLIS2Q9BZE0 524 aaPredicted RBP11.31□□□□□ -0.6
COPB1-210ENST00000533533 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
COPB1-210ENST00000533533 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
COPB1-210ENST00000533533 ABCB7O75027 752 aa11.3□□□□□ -0.6
COPB1-210ENST00000533533 AOC2O75106 756 aa11.3□□□□□ -0.6
COPB1-210ENST00000533533 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
COPB1-210ENST00000533533 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
COPB1-210ENST00000533533 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
COPB1-210ENST00000533533 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
COPB1-210ENST00000533533 LRRC37AA6NMS7 1700 aa11.29□□□□□ -0.6
COPB1-210ENST00000533533 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
COPB1-210ENST00000533533 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
COPB1-210ENST00000533533 CDC37L1Q7L3B6 337 aa11.29□□□□□ -0.6
COPB1-210ENST00000533533 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
COPB1-210ENST00000533533 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
COPB1-210ENST00000533533 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
COPB1-210ENST00000533533 CHL1O00533 1208 aa11.28□□□□□ -0.6
COPB1-210ENST00000533533 CA12O43570 354 aa11.28□□□□□ -0.6
COPB1-210ENST00000533533 KRT24Q2M2I5 525 aa11.28□□□□□ -0.6
COPB1-210ENST00000533533 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
COPB1-210ENST00000533533 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
COPB1-210ENST00000533533 SHTN1A0MZ66 631 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 H7C1D1 291 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
COPB1-210ENST00000533533 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 DPF2Q92785 391 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 ZNF428Q96B54 188 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 ZNF408Q9H9D4 720 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
COPB1-210ENST00000533533 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
COPB1-210ENST00000533533 SF3B3Q15393 1217 aaKnown RBP11.26□□□□□ -0.61
COPB1-210ENST00000533533 WASHC4Q2M389 1173 aa11.26□□□□□ -0.61
COPB1-210ENST00000533533 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
COPB1-210ENST00000533533 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
COPB1-210ENST00000533533 FAM89AQ96GI7 184 aa11.26□□□□□ -0.61
COPB1-210ENST00000533533 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
COPB1-210ENST00000533533 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
COPB1-210ENST00000533533 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
COPB1-210ENST00000533533 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms