RNA–Protein interactions for RNA: ENST00000533332.1

SYT13-203, Transcript of synaptotagmin 13, humanhuman

TSL 1 (best)

Gene SYT13, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT13-203ENST00000533332 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
SYT13-203ENST00000533332 TTLL11Q8NHH1 800 aa19.64■□□□□ 0.73
SYT13-203ENST00000533332 CSF1RP07333 972 aa19.63■□□□□ 0.73
SYT13-203ENST00000533332 CTSWP56202 376 aa19.63■□□□□ 0.73
SYT13-203ENST00000533332 TMEM57Q8N5G2 664 aa19.63■□□□□ 0.73
SYT13-203ENST00000533332 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
SYT13-203ENST00000533332 BBOX1O75936 387 aa19.62■□□□□ 0.73
SYT13-203ENST00000533332 GNAI3P08754 354 aa19.62■□□□□ 0.73
SYT13-203ENST00000533332 TNNQ9UQP3 1299 aa19.62■□□□□ 0.73
SYT13-203ENST00000533332 COL11A2P13942 1736 aaPredicted RBP19.62■□□□□ 0.73
SYT13-203ENST00000533332 BRCA1P38398 1863 aaKnown RBP19.62■□□□□ 0.73
SYT13-203ENST00000533332 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
SYT13-203ENST00000533332 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
SYT13-203ENST00000533332 DLEC1Q9Y238 1755 aa19.61■□□□□ 0.73
SYT13-203ENST00000533332 GRIN3BO60391 1043 aa19.61■□□□□ 0.73
SYT13-203ENST00000533332 FOXO4P98177 505 aa19.61■□□□□ 0.73
SYT13-203ENST00000533332 GPR162Q16538 588 aa19.61■□□□□ 0.73
SYT13-203ENST00000533332 BCS1LQ9Y276 419 aa19.61■□□□□ 0.73
SYT13-203ENST00000533332 RTL9Q8NET4 1388 aa19.61■□□□□ 0.73
SYT13-203ENST00000533332 PLIN1O60240 522 aa19.6■□□□□ 0.73
SYT13-203ENST00000533332 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
SYT13-203ENST00000533332 RLBP1P12271 317 aa19.6■□□□□ 0.73
SYT13-203ENST00000533332 PRPF40BQ6NWY9 871 aaKnown RBP19.6■□□□□ 0.73
SYT13-203ENST00000533332 TMC4Q7Z404 712 aa19.6■□□□□ 0.73
SYT13-203ENST00000533332 CHMP4BQ9H444 224 aaKnown RBP19.6■□□□□ 0.73
SYT13-203ENST00000533332 LAMB2P55268 1798 aa19.6■□□□□ 0.73
SYT13-203ENST00000533332 GRAPQ13588 217 aa19.59■□□□□ 0.73
SYT13-203ENST00000533332 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
SYT13-203ENST00000533332 GRAPLQ8TC17 118 aaPredicted RBP19.59■□□□□ 0.73
SYT13-203ENST00000533332 ZBTB7BO15156 539 aaPredicted RBP19.59■□□□□ 0.73
SYT13-203ENST00000533332 GRIPAP1Q4V328 841 aa19.59■□□□□ 0.73
SYT13-203ENST00000533332 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
SYT13-203ENST00000533332 KAZALD1Q96I82 304 aa19.59■□□□□ 0.73
SYT13-203ENST00000533332 SUCLG2Q96I99 432 aa19.59■□□□□ 0.73
SYT13-203ENST00000533332 RABL6Q3YEC7 729 aaPredicted RBP19.58■□□□□ 0.72
SYT13-203ENST00000533332 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.72
SYT13-203ENST00000533332 PANK1Q8TE04 598 aa19.58■□□□□ 0.72
SYT13-203ENST00000533332 C7orf43Q8WVR3 580 aa19.58■□□□□ 0.72
SYT13-203ENST00000533332 MEIS3Q99687 375 aa19.58■□□□□ 0.72
SYT13-203ENST00000533332 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.72
SYT13-203ENST00000533332 RPS8P62241 208 aaKnown RBP19.57■□□□□ 0.72
SYT13-203ENST00000533332 LMBR1LQ6UX01 489 aa19.57■□□□□ 0.72
SYT13-203ENST00000533332 CDC5LQ99459 802 aaKnown RBP19.57■□□□□ 0.72
SYT13-203ENST00000533332 DDX19BQ9UMR2 479 aa19.57■□□□□ 0.72
SYT13-203ENST00000533332 MVPQ14764 893 aaKnown RBP19.56■□□□□ 0.72
SYT13-203ENST00000533332 EPHA10Q5JZY3 1008 aa19.56■□□□□ 0.72
SYT13-203ENST00000533332 TMX4Q9H1E5 349 aaPredicted RBP19.56■□□□□ 0.72
SYT13-203ENST00000533332 GREM2Q9H772 168 aa19.56■□□□□ 0.72
SYT13-203ENST00000533332 SP8Q8IXZ3 490 aa19.56■□□□□ 0.72
SYT13-203ENST00000533332 BICC1Q9H694 974 aaKnown RBP19.56■□□□□ 0.72
SYT13-203ENST00000533332 GNAI2P04899 355 aa19.55■□□□□ 0.72
SYT13-203ENST00000533332 ITGA6P23229 1130 aa19.55■□□□□ 0.72
SYT13-203ENST00000533332 IFIT5Q13325 482 aaKnown RBP19.55■□□□□ 0.72
SYT13-203ENST00000533332 WWC3Q9ULE0 1092 aa19.55■□□□□ 0.72
SYT13-203ENST00000533332 ATP6V0A2Q9Y487 856 aa19.55■□□□□ 0.72
SYT13-203ENST00000533332 ANKRD18BA2A2Z9 1011 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 PPEF1O14829 653 aaPredicted RBP19.54■□□□□ 0.72
SYT13-203ENST00000533332 C21orf2O43822 256 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 CCDC57Q2TAC2 916 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 B4GALNT3Q6L9W6 998 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 ANKRD18AQ8IVF6 992 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 CELF1Q92879 486 aaKnown RBP19.54■□□□□ 0.72
SYT13-203ENST00000533332 SEC31BQ9NQW1 1179 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 CACNA1SQ13698 1873 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 UTRNP46939 3433 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 RTKN2Q8IZC4 609 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 CCDC85AQ96PX6 553 aaPredicted RBP19.54■□□□□ 0.72
SYT13-203ENST00000533332 ANP32EQ9BTT0 268 aa19.54■□□□□ 0.72
SYT13-203ENST00000533332 MYH3P11055 1940 aa19.53■□□□□ 0.72
SYT13-203ENST00000533332 FAM161AQ3B820 660 aa19.53■□□□□ 0.72
SYT13-203ENST00000533332 ANKRD44Q8N8A2 993 aa19.53■□□□□ 0.72
SYT13-203ENST00000533332 BSDC1Q9NW68 430 aaPredicted RBP19.53■□□□□ 0.72
SYT13-203ENST00000533332 COG6Q9Y2V7 657 aa19.53■□□□□ 0.72
SYT13-203ENST00000533332 LRRFIP2Q9Y608 721 aaKnown RBP19.53■□□□□ 0.72
SYT13-203ENST00000533332 IGHMBP2P38935 993 aaKnown RBP19.52■□□□□ 0.72
SYT13-203ENST00000533332 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
SYT13-203ENST00000533332 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
SYT13-203ENST00000533332 CHMP3Q9Y3E7 222 aa19.52■□□□□ 0.72
SYT13-203ENST00000533332 ARFGEF1Q9Y6D6 1849 aa19.51■□□□□ 0.71
SYT13-203ENST00000533332 MTX1Q13505 466 aa19.51■□□□□ 0.71
SYT13-203ENST00000533332 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
SYT13-203ENST00000533332 MPHOSPH8Q99549 860 aa19.51■□□□□ 0.71
SYT13-203ENST00000533332 ARHGAP27Q6ZUM4 889 aa19.5■□□□□ 0.71
SYT13-203ENST00000533332 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
SYT13-203ENST00000533332 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
SYT13-203ENST00000533332 LTBP3Q9NS15 1303 aa19.49■□□□□ 0.71
SYT13-203ENST00000533332 PSMD1Q99460 953 aa19.48■□□□□ 0.71
SYT13-203ENST00000533332 TAF1P21675 1872 aa19.48■□□□□ 0.71
SYT13-203ENST00000533332 TAF7LQ5H9L4 462 aa19.48■□□□□ 0.71
SYT13-203ENST00000533332 ZNF219Q9P2Y4 722 aaPredicted RBP19.48■□□□□ 0.71
SYT13-203ENST00000533332 FBXO3Q9UK99 471 aa19.48■□□□□ 0.71
SYT13-203ENST00000533332 LDHAL6AQ6ZMR3 332 aa19.47■□□□□ 0.71
SYT13-203ENST00000533332 MPNDQ8N594 471 aa19.47■□□□□ 0.71
SYT13-203ENST00000533332 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
SYT13-203ENST00000533332 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
SYT13-203ENST00000533332 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
SYT13-203ENST00000533332 RTFDC1Q9BY42 306 aaPredicted RBP19.46■□□□□ 0.71
SYT13-203ENST00000533332 TAOK3Q9H2K8 898 aa19.46■□□□□ 0.71
SYT13-203ENST00000533332 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
SYT13-203ENST00000533332 COL4A1P02462 1669 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms