RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 TNMDQ9H2S6 317 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 DDX19AQ9NUU7 478 aaKnown RBP17.51■□□□□ 0.39
CAPN1-224ENST00000533129 CGNQ9P2M7 1197 aaKnown RBP17.51■□□□□ 0.39
CAPN1-224ENST00000533129 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 PKD1L3Q7Z443 1732 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 ZNF75DP51815 510 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
CAPN1-224ENST00000533129 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
CAPN1-224ENST00000533129 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 BTBD11A6QL63 1104 aa17.5■□□□□ 0.39
CAPN1-224ENST00000533129 PTH1RQ03431 593 aa17.5■□□□□ 0.39
CAPN1-224ENST00000533129 ANO6Q4KMQ2 910 aa17.5■□□□□ 0.39
CAPN1-224ENST00000533129 PRPF40BQ6NWY9 871 aaKnown RBP17.5■□□□□ 0.39
CAPN1-224ENST00000533129 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-224ENST00000533129 GABPB1Q06547 395 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-224ENST00000533129 C16orf45Q96MC5 204 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-224ENST00000533129 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
CAPN1-224ENST00000533129 TNNT1P13805 278 aa17.49■□□□□ 0.39
CAPN1-224ENST00000533129 EIF4A1P60842 406 aaKnown RBP17.49■□□□□ 0.39
CAPN1-224ENST00000533129 LRMPQ12912 555 aa17.49■□□□□ 0.39
CAPN1-224ENST00000533129 TAF3Q5VWG9 929 aa17.49■□□□□ 0.39
CAPN1-224ENST00000533129 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
CAPN1-224ENST00000533129 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
CAPN1-224ENST00000533129 CAMK4Q16566 473 aa17.49■□□□□ 0.39
CAPN1-224ENST00000533129 PARP4Q9UKK3 1724 aaKnown RBP17.48■□□□□ 0.39
CAPN1-224ENST00000533129 PHKG2P15735 406 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-224ENST00000533129 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 TRIM5Q9C035 493 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 CLSTN2Q9H4D0 955 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
CAPN1-224ENST00000533129 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
CAPN1-224ENST00000533129 CAVIN2O95810 425 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 CDC25BP30305 580 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 COL22A1Q8NFW1 1626 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-224ENST00000533129 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 CKAP2LQ8IYA6 745 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 NRBP1Q9UHY1 535 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 SCN11AQ9UI33 1791 aa17.47■□□□□ 0.39
CAPN1-224ENST00000533129 GOLGA6L4A6NEF3 574 aa17.46■□□□□ 0.39
CAPN1-224ENST00000533129 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
CAPN1-224ENST00000533129 CHMP3Q9Y3E7 222 aa17.46■□□□□ 0.39
CAPN1-224ENST00000533129 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-224ENST00000533129 PSMA5P28066 241 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
CAPN1-224ENST00000533129 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 ANKRD1Q15327 319 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 FERMT3Q86UX7 667 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 CARD10Q9BWT7 1032 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 MORC2Q9Y6X9 1032 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-224ENST00000533129 MRC1P22897 1456 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-224ENST00000533129 CREB3L3Q68CJ9 461 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
CAPN1-224ENST00000533129 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-224ENST00000533129 CLIP2Q9UDT6 1046 aa17.45■□□□□ 0.38
CAPN1-224ENST00000533129 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
CAPN1-224ENST00000533129 DTNBO60941 627 aa17.44■□□□□ 0.38
CAPN1-224ENST00000533129 ZNF165P49910 485 aa17.44■□□□□ 0.38
CAPN1-224ENST00000533129 TPD52L1Q16890 204 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-224ENST00000533129 CACTINQ8WUQ7 758 aaKnown RBP17.44■□□□□ 0.38
CAPN1-224ENST00000533129 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
CAPN1-224ENST00000533129 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
CAPN1-224ENST00000533129 ALDH8A1Q9H2A2 487 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-224ENST00000533129 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
CAPN1-224ENST00000533129 KCNQ3O43525 872 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 NEMFO60524 1076 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 MTX1Q13505 466 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-224ENST00000533129 MAP4K1Q92918 833 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 HIP1O00291 1037 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-224ENST00000533129 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 CEP135Q66GS9 1140 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 SARM1Q6SZW1 724 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 KIF18AQ8NI77 898 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 SNRKQ9NRH2 765 aa17.43■□□□□ 0.38
CAPN1-224ENST00000533129 CYP27B1O15528 508 aa17.42■□□□□ 0.38
CAPN1-224ENST00000533129 EVA1CP58658 441 aa17.42■□□□□ 0.38
CAPN1-224ENST00000533129 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
CAPN1-224ENST00000533129 GIGYF1O75420 1035 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-224ENST00000533129 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
CAPN1-224ENST00000533129 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
CAPN1-224ENST00000533129 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
CAPN1-224ENST00000533129 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 DNAJC25Q9H1X3 360 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 SLC27A2O14975 620 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 KCNJ4P48050 445 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 CCDC144BQ3MJ40 725 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 CCDC144CPQ8IYA2 1237 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms