RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-212ENST00000533058 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
TRAPPC4-212ENST00000533058 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
TRAPPC4-212ENST00000533058 FZD9O00144 591 aa16.5■□□□□ 0.23
TRAPPC4-212ENST00000533058 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-212ENST00000533058 POTECB2RU33 542 aa16.49■□□□□ 0.23
TRAPPC4-212ENST00000533058 PDE8AO60658 829 aa16.49■□□□□ 0.23
TRAPPC4-212ENST00000533058 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
TRAPPC4-212ENST00000533058 SUPT20HQ8NEM7 779 aa16.49■□□□□ 0.23
TRAPPC4-212ENST00000533058 TIAM2Q8IVF5 1701 aa16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 NEURL1BA8MQ27 555 aa16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 DNAAF4Q8WXU2 420 aa16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-212ENST00000533058 CACNA1FO60840 1977 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 H7C1W4 665 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 HSPA6P17066 643 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 FSTL1Q12841 308 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 MPNDQ8N594 471 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 LINS1Q8NG48 757 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 DDX60Q8IY21 1712 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 WDR90Q96KV7 1748 aa16.47■□□□□ 0.23
TRAPPC4-212ENST00000533058 LAMB2P55268 1798 aa16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 DDNO94850 711 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 RPS8P62241 208 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 CWF19L2Q2TBE0 894 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 DPP8Q6V1X1 898 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 CELF1Q92879 486 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-212ENST00000533058 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
TRAPPC4-212ENST00000533058 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-212ENST00000533058 GCKRQ14397 625 aa16.45■□□□□ 0.22
TRAPPC4-212ENST00000533058 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
TRAPPC4-212ENST00000533058 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
TRAPPC4-212ENST00000533058 GPC2Q8N158 579 aa16.44■□□□□ 0.22
TRAPPC4-212ENST00000533058 SMC1BQ8NDV3 1235 aa16.44■□□□□ 0.22
TRAPPC4-212ENST00000533058 PLA2G12BQ9BX93 195 aa16.44■□□□□ 0.22
TRAPPC4-212ENST00000533058 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
TRAPPC4-212ENST00000533058 SMC4Q9NTJ3 1288 aa16.44■□□□□ 0.22
TRAPPC4-212ENST00000533058 EIF6P56537 245 aaKnown RBP16.43■□□□□ 0.22
TRAPPC4-212ENST00000533058 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
TRAPPC4-212ENST00000533058 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
TRAPPC4-212ENST00000533058 ZNF541Q9H0D2 1346 aa16.43■□□□□ 0.22
TRAPPC4-212ENST00000533058 RTL9Q8NET4 1388 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 CASP7P55210 303 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 CTSWP56202 376 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
TRAPPC4-212ENST00000533058 AOC3Q16853 763 aa16.41■□□□□ 0.22
TRAPPC4-212ENST00000533058 UBE3BQ7Z3V4 1068 aa16.41■□□□□ 0.22
TRAPPC4-212ENST00000533058 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-212ENST00000533058 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
TRAPPC4-212ENST00000533058 COL4A5P29400 1685 aa16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 APLP1P51693 650 aa16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-212ENST00000533058 F6X3S4 739 aa16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 ALDH1L1O75891 902 aa16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 CSF1RP07333 972 aa16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 GPSM2P81274 684 aa16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 HACL1Q9UJ83 578 aa16.39■□□□□ 0.21
TRAPPC4-212ENST00000533058 WASHC4Q2M389 1173 aa16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 PNMA8AQ86V59 439 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 EYA3Q99504 573 aa16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 POLLQ9UGP5 575 aa16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 PTPRCP08575 1304 aa16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 DUOX1Q9NRD9 1551 aa16.38■□□□□ 0.21
TRAPPC4-212ENST00000533058 CXCL9Q07325 125 aa16.37■□□□□ 0.21
TRAPPC4-212ENST00000533058 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
TRAPPC4-212ENST00000533058 GREM2Q9H772 168 aa16.37■□□□□ 0.21
TRAPPC4-212ENST00000533058 SCN4AP35499 1836 aa16.37■□□□□ 0.21
TRAPPC4-212ENST00000533058 TAF1P21675 1872 aa16.37■□□□□ 0.21
TRAPPC4-212ENST00000533058 COL4A1P02462 1669 aa16.37■□□□□ 0.21
TRAPPC4-212ENST00000533058 EPHX2P34913 555 aa16.36■□□□□ 0.21
TRAPPC4-212ENST00000533058 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
TRAPPC4-212ENST00000533058 LDHDQ86WU2 507 aa16.36■□□□□ 0.21
TRAPPC4-212ENST00000533058 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-212ENST00000533058 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-212ENST00000533058 SRCIN1Q9C0H9 1055 aa16.36■□□□□ 0.21
TRAPPC4-212ENST00000533058 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 GRM8O00222 908 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 BCAR3O75815 825 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 SCNN1DP51172 638 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 BRPF1P55201 1214 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 TNIP1Q15025 636 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms