RNA–Protein interactions for RNA: ENST00000533056.5

CHID1-221, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-221ENST00000533056 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
CHID1-221ENST00000533056 MTX1Q13505 466 aa11.9□□□□□ -0.5
CHID1-221ENST00000533056 CEP85Q6P2H3 762 aa11.9□□□□□ -0.5
CHID1-221ENST00000533056 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
CHID1-221ENST00000533056 SIRT2Q8IXJ6 389 aa11.9□□□□□ -0.5
CHID1-221ENST00000533056 BICC1Q9H694 974 aaKnown RBP11.9□□□□□ -0.5
CHID1-221ENST00000533056 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
CHID1-221ENST00000533056 PDE8AO60658 829 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 CSF1RP07333 972 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
CHID1-221ENST00000533056 DPEP1P16444 411 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 CTSWP56202 376 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 TGFB2P61812 414 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
CHID1-221ENST00000533056 MYH3P11055 1940 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 PNMA6EA0A0J9YXQ4 647 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 HSP90B1P14625 803 aaKnown RBP11.88□□□□□ -0.51
CHID1-221ENST00000533056 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
CHID1-221ENST00000533056 LMBR1LQ6UX01 489 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 C3orf67Q6ZVT6 689 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 RPAP2Q8IXW5 612 aaPredicted RBP11.88□□□□□ -0.51
CHID1-221ENST00000533056 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
CHID1-221ENST00000533056 ST5P78524 1137 aa11.87□□□□□ -0.51
CHID1-221ENST00000533056 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
CHID1-221ENST00000533056 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
CHID1-221ENST00000533056 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
CHID1-221ENST00000533056 NPHP1O15259 732 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 SRGAP3O43295 1099 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 KCNA3P22001 575 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 HDAC1Q13547 482 aaPredicted RBP11.86□□□□□ -0.51
CHID1-221ENST00000533056 POLA2Q14181 598 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
CHID1-221ENST00000533056 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 BRIP1Q9BX63 1249 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
CHID1-221ENST00000533056 BRCA1P38398 1863 aaKnown RBP11.86□□□□□ -0.51
CHID1-221ENST00000533056 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
CHID1-221ENST00000533056 COL4A1P02462 1669 aa11.85□□□□□ -0.51
CHID1-221ENST00000533056 RFX5P48382 616 aaPredicted RBP11.85□□□□□ -0.51
CHID1-221ENST00000533056 CRY2Q49AN0 593 aa11.85□□□□□ -0.51
CHID1-221ENST00000533056 ARHGAP27Q6ZUM4 889 aa11.85□□□□□ -0.51
CHID1-221ENST00000533056 NLRP3Q96P20 1036 aa11.85□□□□□ -0.51
CHID1-221ENST00000533056 GREM2Q9H772 168 aa11.85□□□□□ -0.51
CHID1-221ENST00000533056 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
CHID1-221ENST00000533056 IGHDP01880 384 aa11.84□□□□□ -0.51
CHID1-221ENST00000533056 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
CHID1-221ENST00000533056 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
CHID1-221ENST00000533056 KIF3CO14782 793 aa11.83□□□□□ -0.52
CHID1-221ENST00000533056 HMMRO75330 724 aa11.83□□□□□ -0.52
CHID1-221ENST00000533056 CHRNA5P30532 468 aa11.83□□□□□ -0.52
CHID1-221ENST00000533056 HOXA10P31260 410 aaPredicted RBP11.83□□□□□ -0.52
CHID1-221ENST00000533056 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
CHID1-221ENST00000533056 CHMP3Q9Y3E7 222 aa11.83□□□□□ -0.52
CHID1-221ENST00000533056 KDM2BQ8NHM5 1336 aa11.83□□□□□ -0.52
CHID1-221ENST00000533056 SRGNP10124 158 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 ITGA6P23229 1130 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 PDE6BP35913 854 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
CHID1-221ENST00000533056 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 RWDD1Q9H446 243 aaPredicted RBP11.82□□□□□ -0.52
CHID1-221ENST00000533056 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
CHID1-221ENST00000533056 DLEC1Q9Y238 1755 aa11.82□□□□□ -0.52
CHID1-221ENST00000533056 ANKRD18BA2A2Z9 1011 aa11.81□□□□□ -0.52
CHID1-221ENST00000533056 DALRD3Q5D0E6 543 aaKnown RBP11.81□□□□□ -0.52
CHID1-221ENST00000533056 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
CHID1-221ENST00000533056 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
CHID1-221ENST00000533056 ZNF594Q96JF6 807 aaPredicted RBP11.81□□□□□ -0.52
CHID1-221ENST00000533056 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
CHID1-221ENST00000533056 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
CHID1-221ENST00000533056 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
CHID1-221ENST00000533056 HSPA6P17066 643 aa11.8□□□□□ -0.52
CHID1-221ENST00000533056 C9orf131Q5VYM1 1079 aa11.8□□□□□ -0.52
CHID1-221ENST00000533056 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
CHID1-221ENST00000533056 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
CHID1-221ENST00000533056 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
CHID1-221ENST00000533056 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 TAF1P21675 1872 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 SURF6O75683 361 aaKnown RBP11.79□□□□□ -0.52
CHID1-221ENST00000533056 NPR1P16066 1061 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 GRAPQ13588 217 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
CHID1-221ENST00000533056 CENPQQ7L2Z9 268 aaPredicted RBP11.79□□□□□ -0.52
CHID1-221ENST00000533056 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
CHID1-221ENST00000533056 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
CHID1-221ENST00000533056 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
CHID1-221ENST00000533056 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
CHID1-221ENST00000533056 H0YIN7 160 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms