RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 BBOX1O75936 387 aa19.62■□□□□ 0.73
CPSF1-210ENST00000532935 NMRK2Q9NPI5 230 aa19.62■□□□□ 0.73
CPSF1-210ENST00000532935 COL4A1P02462 1669 aa19.62■□□□□ 0.73
CPSF1-210ENST00000532935 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
CPSF1-210ENST00000532935 GLTPD2A6NH11 291 aa19.61■□□□□ 0.73
CPSF1-210ENST00000532935 C1QTNF8P60827 252 aa19.61■□□□□ 0.73
CPSF1-210ENST00000532935 TMX4Q9H1E5 349 aaPredicted RBP19.61■□□□□ 0.73
CPSF1-210ENST00000532935 PDE8AO60658 829 aa19.6■□□□□ 0.73
CPSF1-210ENST00000532935 IARSP41252 1262 aaKnown RBP19.6■□□□□ 0.73
CPSF1-210ENST00000532935 SP8Q8IXZ3 490 aa19.6■□□□□ 0.73
CPSF1-210ENST00000532935 TRMT2AQ8IZ69 625 aaKnown RBP19.6■□□□□ 0.73
CPSF1-210ENST00000532935 WDR90Q96KV7 1748 aa19.59■□□□□ 0.73
CPSF1-210ENST00000532935 LINS1Q8NG48 757 aa19.59■□□□□ 0.73
CPSF1-210ENST00000532935 SPEF2Q9C093 1822 aa19.58■□□□□ 0.73
CPSF1-210ENST00000532935 F6X3S4 739 aa19.58■□□□□ 0.72
CPSF1-210ENST00000532935 GCKRQ14397 625 aa19.58■□□□□ 0.72
CPSF1-210ENST00000532935 TMC4Q7Z404 712 aa19.58■□□□□ 0.72
CPSF1-210ENST00000532935 CELF1Q92879 486 aaKnown RBP19.58■□□□□ 0.72
CPSF1-210ENST00000532935 H7C1W4 665 aa19.57■□□□□ 0.72
CPSF1-210ENST00000532935 CCDC152Q4G0S7 254 aa19.57■□□□□ 0.72
CPSF1-210ENST00000532935 DPY19L2Q6NUT2 758 aa19.57■□□□□ 0.72
CPSF1-210ENST00000532935 UBE3BQ7Z3V4 1068 aa19.57■□□□□ 0.72
CPSF1-210ENST00000532935 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
CPSF1-210ENST00000532935 COL4A5P29400 1685 aa19.56■□□□□ 0.72
CPSF1-210ENST00000532935 MRPL50Q8N5N7 158 aaKnown RBP19.56■□□□□ 0.72
CPSF1-210ENST00000532935 CTSWP56202 376 aa19.55■□□□□ 0.72
CPSF1-210ENST00000532935 LTBP1Q14766 1721 aa19.55■□□□□ 0.72
CPSF1-210ENST00000532935 BEND3Q5T5X7 828 aa19.55■□□□□ 0.72
CPSF1-210ENST00000532935 DPP8Q6V1X1 898 aaPredicted RBP19.55■□□□□ 0.72
CPSF1-210ENST00000532935 MPNDQ8N594 471 aa19.55■□□□□ 0.72
CPSF1-210ENST00000532935 SSH1Q8WYL5 1049 aa19.55■□□□□ 0.72
CPSF1-210ENST00000532935 CCDC85AQ96PX6 553 aaPredicted RBP19.55■□□□□ 0.72
CPSF1-210ENST00000532935 SEC31BQ9NQW1 1179 aa19.55■□□□□ 0.72
CPSF1-210ENST00000532935 DUOX1Q9NRD9 1551 aa19.54■□□□□ 0.72
CPSF1-210ENST00000532935 RPS8P62241 208 aaKnown RBP19.54■□□□□ 0.72
CPSF1-210ENST00000532935 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
CPSF1-210ENST00000532935 RTFDC1Q9BY42 306 aaPredicted RBP19.54■□□□□ 0.72
CPSF1-210ENST00000532935 SCN4AP35499 1836 aa19.53■□□□□ 0.72
CPSF1-210ENST00000532935 DDNO94850 711 aaPredicted RBP19.53■□□□□ 0.72
CPSF1-210ENST00000532935 CASP7P55210 303 aa19.53■□□□□ 0.72
CPSF1-210ENST00000532935 LARGE2Q8N3Y3 721 aa19.53■□□□□ 0.72
CPSF1-210ENST00000532935 SUPT20HQ8NEM7 779 aa19.53■□□□□ 0.72
CPSF1-210ENST00000532935 TTLL11Q8NHH1 800 aa19.53■□□□□ 0.72
CPSF1-210ENST00000532935 ZNF541Q9H0D2 1346 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 FZD9O00144 591 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 PPIP5K2O43314 1243 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 TOMM70O94826 608 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 CT47B1P0C2W7 299 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-210ENST00000532935 VEGFAP15692 232 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-210ENST00000532935 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.72
CPSF1-210ENST00000532935 ALDH1L2Q3SY69 923 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 SLC4A10Q6U841 1118 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 C16orf71Q8IYS4 520 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-210ENST00000532935 PLA2G12BQ9BX93 195 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 VPS33BQ9H267 617 aa19.52■□□□□ 0.72
CPSF1-210ENST00000532935 PTPRCP08575 1304 aa19.51■□□□□ 0.71
CPSF1-210ENST00000532935 AOC3Q16853 763 aa19.51■□□□□ 0.71
CPSF1-210ENST00000532935 RTL9Q8NET4 1388 aa19.51■□□□□ 0.71
CPSF1-210ENST00000532935 POTECB2RU33 542 aa19.5■□□□□ 0.71
CPSF1-210ENST00000532935 GREM2Q9H772 168 aa19.5■□□□□ 0.71
CPSF1-210ENST00000532935 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
CPSF1-210ENST00000532935 ALDH1L1O75891 902 aa19.49■□□□□ 0.71
CPSF1-210ENST00000532935 GPSM2P81274 684 aa19.49■□□□□ 0.71
CPSF1-210ENST00000532935 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
CPSF1-210ENST00000532935 NIM1KQ8IY84 436 aa19.49■□□□□ 0.71
CPSF1-210ENST00000532935 RBM46Q8TBY0 533 aaKnown RBP19.49■□□□□ 0.71
CPSF1-210ENST00000532935 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
CPSF1-210ENST00000532935 SRCIN1Q9C0H9 1055 aa19.49■□□□□ 0.71
CPSF1-210ENST00000532935 NSFL1CQ9UNZ2 370 aaKnown RBP19.49■□□□□ 0.71
CPSF1-210ENST00000532935 GRM8O00222 908 aa19.48■□□□□ 0.71
CPSF1-210ENST00000532935 EIF6P56537 245 aaKnown RBP19.48■□□□□ 0.71
CPSF1-210ENST00000532935 KIAA2012Q0VF49 1180 aa19.48■□□□□ 0.71
CPSF1-210ENST00000532935 L3MBTL3Q96JM7 780 aaPredicted RBP19.48■□□□□ 0.71
CPSF1-210ENST00000532935 CSF1RP07333 972 aa19.47■□□□□ 0.71
CPSF1-210ENST00000532935 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
CPSF1-210ENST00000532935 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
CPSF1-210ENST00000532935 GPC2Q8N158 579 aa19.46■□□□□ 0.71
CPSF1-210ENST00000532935 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
CPSF1-210ENST00000532935 POLLQ9UGP5 575 aa19.46■□□□□ 0.71
CPSF1-210ENST00000532935 CEP350Q5VT06 3117 aa19.46■□□□□ 0.71
CPSF1-210ENST00000532935 IQCA1LA6NCM1 817 aa19.45■□□□□ 0.7
CPSF1-210ENST00000532935 C6orf229H3BNL8 230 aa19.45■□□□□ 0.7
CPSF1-210ENST00000532935 FOXO4P98177 505 aa19.45■□□□□ 0.7
CPSF1-210ENST00000532935 TBC1D16Q8TBP0 767 aa19.45■□□□□ 0.7
CPSF1-210ENST00000532935 ANKIB1Q9P2G1 1089 aa19.45■□□□□ 0.7
CPSF1-210ENST00000532935 ZNRF3Q9ULT6 936 aa19.45■□□□□ 0.7
CPSF1-210ENST00000532935 ITGA6P23229 1130 aa19.44■□□□□ 0.7
CPSF1-210ENST00000532935 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-210ENST00000532935 WASHC4Q2M389 1173 aa19.44■□□□□ 0.7
CPSF1-210ENST00000532935 BSDC1Q9NW68 430 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-210ENST00000532935 GJA3Q9Y6H8 435 aa19.44■□□□□ 0.7
CPSF1-210ENST00000532935 A0A1B0GUL6 1792 aa19.44■□□□□ 0.7
CPSF1-210ENST00000532935 IGHMBP2P38935 993 aaKnown RBP19.43■□□□□ 0.7
CPSF1-210ENST00000532935 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
CPSF1-210ENST00000532935 FSTL1Q12841 308 aa19.43■□□□□ 0.7
CPSF1-210ENST00000532935 EYA3Q99504 573 aa19.43■□□□□ 0.7
CPSF1-210ENST00000532935 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
CPSF1-210ENST00000532935 XDHP47989 1333 aa19.43■□□□□ 0.7
CPSF1-210ENST00000532935 RIMBP2O15034 1052 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms