RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
PUF60-220ENST00000532884 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.54
PUF60-220ENST00000532884 CCDC152Q4G0S7 254 aa18.39■□□□□ 0.53
PUF60-220ENST00000532884 SP8Q8IXZ3 490 aa18.39■□□□□ 0.53
PUF60-220ENST00000532884 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
PUF60-220ENST00000532884 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
PUF60-220ENST00000532884 H7C1W4 665 aa18.38■□□□□ 0.53
PUF60-220ENST00000532884 IARSP41252 1262 aaKnown RBP18.38■□□□□ 0.53
PUF60-220ENST00000532884 DPY19L2Q6NUT2 758 aa18.38■□□□□ 0.53
PUF60-220ENST00000532884 PSMD1Q99460 953 aa18.38■□□□□ 0.53
PUF60-220ENST00000532884 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
PUF60-220ENST00000532884 LAMB2P55268 1798 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
PUF60-220ENST00000532884 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 DPP8Q6V1X1 898 aaPredicted RBP18.37■□□□□ 0.53
PUF60-220ENST00000532884 MPNDQ8N594 471 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 CDHR2Q9BYE9 1310 aa18.37■□□□□ 0.53
PUF60-220ENST00000532884 ZC3H4Q9UPT8 1303 aaKnown RBP18.37■□□□□ 0.53
PUF60-220ENST00000532884 KIF3CO14782 793 aa18.36■□□□□ 0.53
PUF60-220ENST00000532884 CTSWP56202 376 aa18.36■□□□□ 0.53
PUF60-220ENST00000532884 C1QTNF8P60827 252 aa18.36■□□□□ 0.53
PUF60-220ENST00000532884 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
PUF60-220ENST00000532884 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
PUF60-220ENST00000532884 JDP2Q8WYK2 163 aa18.36■□□□□ 0.53
PUF60-220ENST00000532884 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
PUF60-220ENST00000532884 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
PUF60-220ENST00000532884 TAF1P21675 1872 aa18.35■□□□□ 0.53
PUF60-220ENST00000532884 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
PUF60-220ENST00000532884 PPIP5K2O43314 1243 aa18.34■□□□□ 0.53
PUF60-220ENST00000532884 DDNO94850 711 aaPredicted RBP18.34■□□□□ 0.53
PUF60-220ENST00000532884 AOC3Q16853 763 aa18.34■□□□□ 0.53
PUF60-220ENST00000532884 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
PUF60-220ENST00000532884 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
PUF60-220ENST00000532884 SRCIN1Q9C0H9 1055 aa18.34■□□□□ 0.53
PUF60-220ENST00000532884 CACNA1FO60840 1977 aa18.33■□□□□ 0.53
PUF60-220ENST00000532884 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
PUF60-220ENST00000532884 SUPT20HQ8NEM7 779 aa18.33■□□□□ 0.52
PUF60-220ENST00000532884 GREM2Q9H772 168 aa18.33■□□□□ 0.52
PUF60-220ENST00000532884 C9orf78Q9NZ63 289 aaPredicted RBP18.33■□□□□ 0.52
PUF60-220ENST00000532884 CASP7P55210 303 aa18.32■□□□□ 0.52
PUF60-220ENST00000532884 GPSM2P81274 684 aa18.32■□□□□ 0.52
PUF60-220ENST00000532884 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
PUF60-220ENST00000532884 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
PUF60-220ENST00000532884 PTPRCP08575 1304 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 GRM8O00222 908 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
PUF60-220ENST00000532884 VEGFAP15692 232 aaPredicted RBP18.31■□□□□ 0.52
PUF60-220ENST00000532884 NIM1KQ8IY84 436 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 CHMP3Q9Y3E7 222 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 COL4A1P02462 1669 aa18.31■□□□□ 0.52
PUF60-220ENST00000532884 ALDH1L1O75891 902 aa18.3■□□□□ 0.52
PUF60-220ENST00000532884 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
PUF60-220ENST00000532884 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
PUF60-220ENST00000532884 ANKIB1Q9P2G1 1089 aa18.3■□□□□ 0.52
PUF60-220ENST00000532884 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
PUF60-220ENST00000532884 GJA3Q9Y6H8 435 aa18.3■□□□□ 0.52
PUF60-220ENST00000532884 FZD9O00144 591 aa18.29■□□□□ 0.52
PUF60-220ENST00000532884 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
PUF60-220ENST00000532884 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
PUF60-220ENST00000532884 EIF6P56537 245 aaKnown RBP18.29■□□□□ 0.52
PUF60-220ENST00000532884 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
PUF60-220ENST00000532884 GPR101Q96P66 508 aaPredicted RBP18.29■□□□□ 0.52
PUF60-220ENST00000532884 PLA2G12BQ9BX93 195 aa18.29■□□□□ 0.52
PUF60-220ENST00000532884 POTECB2RU33 542 aa18.28■□□□□ 0.52
PUF60-220ENST00000532884 TOMM70O94826 608 aa18.28■□□□□ 0.52
PUF60-220ENST00000532884 ITGA6P23229 1130 aa18.28■□□□□ 0.52
PUF60-220ENST00000532884 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
PUF60-220ENST00000532884 POLLQ9UGP5 575 aa18.28■□□□□ 0.52
PUF60-220ENST00000532884 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.52
PUF60-220ENST00000532884 CSF1RP07333 972 aa18.27■□□□□ 0.52
PUF60-220ENST00000532884 FOXO4P98177 505 aa18.27■□□□□ 0.52
PUF60-220ENST00000532884 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.52
PUF60-220ENST00000532884 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
PUF60-220ENST00000532884 COL4A5P29400 1685 aa18.27■□□□□ 0.52
PUF60-220ENST00000532884 UFL1O94874 794 aa18.26■□□□□ 0.51
PUF60-220ENST00000532884 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
PUF60-220ENST00000532884 IGHMBP2P38935 993 aaKnown RBP18.26■□□□□ 0.51
PUF60-220ENST00000532884 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
PUF60-220ENST00000532884 TBC1D16Q8TBP0 767 aa18.26■□□□□ 0.51
PUF60-220ENST00000532884 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
PUF60-220ENST00000532884 ZNRF3Q9ULT6 936 aa18.26■□□□□ 0.51
PUF60-220ENST00000532884 ANKRD18BA2A2Z9 1011 aa18.25■□□□□ 0.51
PUF60-220ENST00000532884 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
PUF60-220ENST00000532884 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
PUF60-220ENST00000532884 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
PUF60-220ENST00000532884 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
PUF60-220ENST00000532884 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
PUF60-220ENST00000532884 ZBED9Q6R2W3 1325 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 G3V3G9 751 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 BCAR3O75815 825 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 RAD17O75943 681 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 DOK7Q18PE1 504 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 DCAF8Q5TAQ9 597 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 GPC2Q8N158 579 aa18.24■□□□□ 0.51
PUF60-220ENST00000532884 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms