RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.33
PCDHA9-202ENST00000532602 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.33
PCDHA9-202ENST00000532602 STXBP4Q6ZWJ1 553 aa17.08■□□□□ 0.33
PCDHA9-202ENST00000532602 IL27Q8NEV9 243 aa17.08■□□□□ 0.33
PCDHA9-202ENST00000532602 TCEANC2Q96MN5 208 aa17.08■□□□□ 0.33
PCDHA9-202ENST00000532602 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
PCDHA9-202ENST00000532602 NEK1Q96PY6 1258 aa17.08■□□□□ 0.32
PCDHA9-202ENST00000532602 TSPYL1Q9H0U9 437 aa17.08■□□□□ 0.32
PCDHA9-202ENST00000532602 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.32
PCDHA9-202ENST00000532602 MCM4P33991 863 aa17.08■□□□□ 0.32
PCDHA9-202ENST00000532602 TFIP11Q9UBB9 837 aaKnown RBP17.08■□□□□ 0.32
PCDHA9-202ENST00000532602 AMPD3Q01432 767 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 CACNA2D4Q7Z3S7 1137 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 SHANK2Q9UPX8 1470 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 PCDHB15Q9Y5E8 787 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 NUCB1Q02818 461 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 SDSP20132 328 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 GBP2P32456 591 aaPredicted RBP17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 LEKR1Q6ZMV7 388 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 CTAGE5O15320 804 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 TSPY3P0CV98 308 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 TSPY8P0CW00 308 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 HMG20BQ9P0W2 317 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
PCDHA9-202ENST00000532602 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 ENOX2Q16206 610 aaKnown RBP17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 PZPP20742 1482 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 MIGA1Q8NAN2 632 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 TFCP2Q12800 502 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
PCDHA9-202ENST00000532602 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 KIF2AO00139 706 aaPredicted RBP17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 SFPQP23246 707 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
PCDHA9-202ENST00000532602 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 CKAP2LQ8IYA6 745 aa17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
PCDHA9-202ENST00000532602 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 TAX1BP1Q86VP1 789 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 MAGEB6Q8N7X4 407 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 SAMM50Q9Y512 469 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 ZSCAN12O43309 604 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 CNNM3Q8NE01 707 aa17.03■□□□□ 0.32
PCDHA9-202ENST00000532602 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 G2E3Q7L622 706 aa17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 VAMP4O75379 141 aa17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 PDE1AP54750 535 aa17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 PAG1Q9NWQ8 432 aa17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
PCDHA9-202ENST00000532602 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
PCDHA9-202ENST00000532602 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.31
PCDHA9-202ENST00000532602 BIN1O00499 593 aa17.02■□□□□ 0.31
PCDHA9-202ENST00000532602 ANAPC15P60006 121 aa17.02■□□□□ 0.31
PCDHA9-202ENST00000532602 WTAPQ15007 396 aa17.02■□□□□ 0.31
PCDHA9-202ENST00000532602 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.31
PCDHA9-202ENST00000532602 MAGEB6P1A0A0J9YX57 407 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 POLD1P28340 1107 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 UBA7P41226 1012 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 FAM89AQ96GI7 184 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 CENPHQ9H3R5 247 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 CCDC183Q5T5S1 534 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 KRT23Q9C075 422 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 IL15P40933 162 aaPredicted RBP17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 CCDC66A2RUB6 948 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 RLBP1P12271 317 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
PCDHA9-202ENST00000532602 COL17A1Q9UMD9 1497 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 909 ms