RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 LRRC4BQ9NT99 713 aa11.66□□□□□ -0.54
CDC27-208ENST00000532575 HMGB2P26583 209 aaKnown RBP11.65□□□□□ -0.54
CDC27-208ENST00000532575 AGERQ15109 404 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 SH3RF1Q7Z6J0 888 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 NME9Q86XW9 330 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
CDC27-208ENST00000532575 TMC1Q8TDI8 760 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 TERF2IPQ9NYB0 399 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
CDC27-208ENST00000532575 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
CDC27-208ENST00000532575 BPHLQ86WA6 291 aaPredicted RBP11.64□□□□□ -0.55
CDC27-208ENST00000532575 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
CDC27-208ENST00000532575 POM121Q96HA1 1249 aa11.64□□□□□ -0.55
CDC27-208ENST00000532575 MRGPRX2Q96LB1 330 aa11.64□□□□□ -0.55
CDC27-208ENST00000532575 PRM3Q9NNZ6 103 aa11.64□□□□□ -0.55
CDC27-208ENST00000532575 COG6Q9Y2V7 657 aa11.64□□□□□ -0.55
CDC27-208ENST00000532575 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
CDC27-208ENST00000532575 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
CDC27-208ENST00000532575 GRIN3BO60391 1043 aa11.63□□□□□ -0.55
CDC27-208ENST00000532575 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
CDC27-208ENST00000532575 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
CDC27-208ENST00000532575 IP6K1Q92551 441 aa11.63□□□□□ -0.55
CDC27-208ENST00000532575 OCSTAMPQ9BR26 566 aa11.63□□□□□ -0.55
CDC27-208ENST00000532575 RGPD5Q99666 1765 aa11.63□□□□□ -0.55
CDC27-208ENST00000532575 PTK2Q05397 1052 aa11.62□□□□□ -0.55
CDC27-208ENST00000532575 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
CDC27-208ENST00000532575 PUS7Q96PZ0 661 aaKnown RBP11.62□□□□□ -0.55
CDC27-208ENST00000532575 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
CDC27-208ENST00000532575 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
CDC27-208ENST00000532575 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 VARSP26640 1264 aaKnown RBP11.61□□□□□ -0.55
CDC27-208ENST00000532575 PRR20EP86478 221 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 PRR20CP86479 221 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 PRR20DP86480 221 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 PRR20BP86481 221 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 PRR20AP86496 221 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 ARHGAP9Q9BRR9 750 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 CARD14Q9BXL6 1004 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 GPSM3Q9Y4H4 160 aa11.61□□□□□ -0.55
CDC27-208ENST00000532575 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 CHD4Q14839 1912 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 ABL2P42684 1182 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 IRF5Q13568 498 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
CDC27-208ENST00000532575 LTV1Q96GA3 475 aaPredicted RBP11.6□□□□□ -0.55
CDC27-208ENST00000532575 PDZRN3Q9UPQ7 1066 aa11.6□□□□□ -0.55
CDC27-208ENST00000532575 SIAH2O43255 324 aa11.59□□□□□ -0.55
CDC27-208ENST00000532575 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
CDC27-208ENST00000532575 BTAF1O14981 1849 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 ZBBXA8MT70 800 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 FBXO45P0C2W1 286 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 AMPHP49418 695 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 COG3Q96JB2 828 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 C1QTNF2Q9BXJ5 285 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
CDC27-208ENST00000532575 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 USP54Q70EL1 1684 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 RAD21O60216 631 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 KCNQ4P56696 695 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 ZBTB33Q86T24 672 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 NLGN2Q8NFZ4 835 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 FAM174AQ8TBP5 190 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 ADAM32Q8TC27 787 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
CDC27-208ENST00000532575 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 USP47Q96K76 1375 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 HOXC9P31274 260 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 TOR4AQ9NXH8 423 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 TLL2Q9Y6L7 1015 aa11.56□□□□□ -0.56
CDC27-208ENST00000532575 KAT6BQ8WYB5 2073 aa11.55□□□□□ -0.56
CDC27-208ENST00000532575 GFRA3O60609 400 aa11.55□□□□□ -0.56
CDC27-208ENST00000532575 NR1H3Q13133 447 aa11.55□□□□□ -0.56
CDC27-208ENST00000532575 COL23A1Q86Y22 540 aaPredicted RBP11.55□□□□□ -0.56
CDC27-208ENST00000532575 SNIP1Q8TAD8 396 aaKnown RBP11.55□□□□□ -0.56
CDC27-208ENST00000532575 CD2APQ9Y5K6 639 aa11.55□□□□□ -0.56
CDC27-208ENST00000532575 MAP3K19Q56UN5 1328 aa11.55□□□□□ -0.56
CDC27-208ENST00000532575 YBX3P16989 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDC27-208ENST00000532575 TRMT44Q8IYL2 757 aaKnown RBP11.54□□□□□ -0.56
CDC27-208ENST00000532575 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
CDC27-208ENST00000532575 LTN1O94822 1766 aa11.54□□□□□ -0.56
CDC27-208ENST00000532575 NSD2O96028 1365 aa11.54□□□□□ -0.56
CDC27-208ENST00000532575 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
CDC27-208ENST00000532575 TTC24A2A3L6 582 aaPredicted RBP11.53□□□□□ -0.56
CDC27-208ENST00000532575 IRX2Q9BZI1 471 aaPredicted RBP11.53□□□□□ -0.56
CDC27-208ENST00000532575 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.56
CDC27-208ENST00000532575 TATP17735 454 aaPredicted RBP11.52□□□□□ -0.57
CDC27-208ENST00000532575 MPNDQ8N594 471 aa11.52□□□□□ -0.57
CDC27-208ENST00000532575 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
CDC27-208ENST00000532575 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms